RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 GJA10Q969M2 543 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 ERAP1Q9NZ08 941 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 LSM7Q9UK45 103 aaKnown RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 CYP2D7A0A087X1C5 515 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 SPDYE16A6NNV3 312 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 STRNO43815 780 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 CYP2B6P20813 491 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 MUTP22033 750 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 SPDYE2Q495Y8 402 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF484Q5JVG2 852 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 SKAP1Q86WV1 359 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 GPR182O15218 404 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 MYCP01106 439 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 H2AFZP0C0S5 128 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 DNAJC24Q6P3W2 148 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 H2AFVQ71UI9 128 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 SGMS1Q86VZ5 419 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 RHPN2Q8IUC4 686 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 ENAHQ8N8S7 591 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 OR6B3Q8NGW1 331 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 TNIP3Q96KP6 325 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 ARFGAP3Q9NP61 516 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 MTMR6Q9Y217 621 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 IPO5O00410 1097 aaKnown RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 DGAT1O75907 488 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 C6orf222P0C671 652 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF18P17022 549 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 CAP2P40123 477 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 HAUS6Q7Z4H7 955 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 MB21D2Q8IYB1 491 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 CCDC105Q8IYK2 499 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 NKX2-3Q8TAU0 364 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 GANCQ8TET4 914 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 ACAP3Q96P50 834 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 MXRA7P84157 204 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZBTB16Q05516 673 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 PPATQ06203 517 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 NECTIN1Q15223 517 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 RFX6Q8HWS3 928 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 UBN1Q9NPG3 1134 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 GOLGA8QA0A0J9YX86 632 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 ESYT2A0FGR8 921 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 GOLGA8OA6NCC3 632 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 GOLGA8NF8WBI6 632 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 HSPA6P17066 643 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 PLD1Q13393 1074 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 LONRF2Q1L5Z9 754 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 CASC4Q6P4E1 433 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 TBC1D10CQ8IV04 446 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 VPS52Q8N1B4 723 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 UIMC1Q96RL1 719 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 USP28Q96RU2 1077 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 PAIP2Q9BPZ3 127 aaKnown RBP10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 LY9Q9HBG7 655 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 INPP5FQ9Y2H2 1132 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 PEX3P56589 373 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 ARHGAP18Q8N392 663 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 HTATIP2Q9BUP3 242 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 COLEC11Q9BWP8 271 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 LZTFL1Q9NQ48 299 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 RPS6KA5O75582 802 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 CALB1P05937 261 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 CCNE1P24864 410 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF699Q32M78 642 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 RAB44Q7Z6P3 723 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 RPUSD2Q8IZ73 545 aaKnown RBP10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 SEPT8Q92599 483 aa10.53□□□□□ -0.72
TNFRSF9-204ENST00000615230 PRPSAP2O60256 369 aa10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 ICAM1P05362 532 aa10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 MYBL1P10243 752 aa10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 SLC26A2P50443 739 aa10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF75DP51815 510 aa10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 POLR2FP61218 127 aaKnown RBP10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 PDIA5Q14554 519 aa10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 SRRM1Q8IYB3 904 aaKnown RBP10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 STKLD1Q8NE28 680 aa10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 DYDC2Q96IM9 177 aa10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 FAM207AQ9NSI2 230 aaPredicted RBP10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 DIS3Q9Y2L1 958 aaKnown RBP10.52□□□□□ -0.72
TNFRSF9-204ENST00000615230 POTEB3A0JP26 581 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 MYO1FO00160 1098 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 RAD51Q06609 339 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 PPIL2Q13356 520 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 POTEBQ6S5H4 581 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 CCDC25Q86WR0 208 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 PGBD1Q96JS3 809 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 MRIQ9BWK5 157 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 TMEM51Q9NW97 253 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 MKRN1Q9UHC7 482 aaKnown RBP10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 STAP1Q9ULZ2 295 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 DYNC1LI2O43237 492 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 TAP1Q03518 808 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 SETDB1Q15047 1291 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 CEP55Q53EZ4 464 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 CD302Q8IX05 232 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 GPD1LQ8N335 351 aa10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 DDX23Q9BUQ8 820 aaKnown RBP10.52□□□□□ -0.73
TNFRSF9-204ENST00000615230 SUCLA2Q9P2R7 463 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms