RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 ODF2LQ9ULJ1 636 aa15.89■□□□□ 0.13
SNPH-203ENST00000614659 RRP15Q9Y3B9 282 aaKnown RBP15.89■□□□□ 0.13
SNPH-203ENST00000614659 PDS5AQ29RF7 1337 aaKnown RBP15.88■□□□□ 0.13
SNPH-203ENST00000614659 GMNNO75496 209 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 CDC25AP30304 524 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 SMC1BQ8NDV3 1235 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 TNPO2O14787 897 aaKnown RBP15.88■□□□□ 0.13
SNPH-203ENST00000614659 MED7O43513 233 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 GFPT2O94808 682 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 CETPP11597 493 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 ZNF157P51786 506 aaPredicted RBP15.88■□□□□ 0.13
SNPH-203ENST00000614659 SLFN12LQ6IEE8 588 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 MORC4Q8TE76 937 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 PCDHB4Q9Y5E5 795 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 MORC2Q9Y6X9 1032 aaPredicted RBP15.88■□□□□ 0.13
SNPH-203ENST00000614659 MROH1Q8NDA8 1641 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 KDM4FA0A1W2PPD8 638 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 OATP04181 439 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 KRT76Q01546 638 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 PDIA5Q14554 519 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 TERF2Q15554 542 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 FAM83BQ5T0W9 1011 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 ALKBH5Q6P6C2 394 aaKnown RBP15.88■□□□□ 0.13
SNPH-203ENST00000614659 MRRFQ96E11 262 aaKnown RBP15.88■□□□□ 0.13
SNPH-203ENST00000614659 CAPN11Q9UMQ6 739 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 PODXLO00592 558 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 HDLBPQ00341 1268 aaKnown RBP15.88■□□□□ 0.13
SNPH-203ENST00000614659 NAALADL2Q58DX5 795 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 PROCA1Q8NCQ7 364 aaPredicted RBP15.88■□□□□ 0.13
SNPH-203ENST00000614659 PPP4R1Q8TF05 950 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 GBP5Q96PP8 586 aa15.88■□□□□ 0.13
SNPH-203ENST00000614659 FTCDO95954 541 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 CYP2D6P10635 497 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 PRDX5P30044 214 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 SFNP31947 248 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 USP11P51784 963 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 COASYQ13057 564 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 NNTQ13423 1086 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 TAF1CQ15572 869 aaPredicted RBP15.87■□□□□ 0.13
SNPH-203ENST00000614659 SGO2Q562F6 1265 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 MICAL1Q8TDZ2 1067 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.87■□□□□ 0.13
SNPH-203ENST00000614659 CCT5P48643 541 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 LIG3P49916 1009 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 TNFAIP2Q03169 654 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 MYO1EQ12965 1108 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 RASA3Q14644 834 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 CCT6BQ92526 530 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 FAM84BQ96KN1 310 aaPredicted RBP15.87■□□□□ 0.13
SNPH-203ENST00000614659 VPS33BQ9H267 617 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 ZNF148Q9UQR1 794 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 ADCY2Q08462 1091 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 MAP7Q14244 749 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 ARHGEF18Q6ZSZ5 1173 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 TBC1D31Q96DN5 1066 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 SNX25Q9H3E2 840 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 KIAA1586Q9HCI6 787 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 ANKFY1Q9P2R3 1169 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 PCDHA6Q9UN73 950 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 PCDHA8Q9Y5H6 950 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 SYNGAP1Q96PV0 1343 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 SORBS3O60504 671 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 PRELPP51888 382 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 SPP2Q13103 211 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 MGARPQ8TDB4 240 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 UBE2TQ9NPD8 197 aaPredicted RBP15.87■□□□□ 0.13
SNPH-203ENST00000614659 RNF146Q9NTX7 359 aa15.87■□□□□ 0.13
SNPH-203ENST00000614659 NOC2LQ9Y3T9 749 aaKnown RBP15.87■□□□□ 0.13
SNPH-203ENST00000614659 DR1Q01658 176 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 SCARF1Q14162 830 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 LRRC8CQ8TDW0 803 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 SCINQ9Y6U3 715 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 CCZ1BP86790 482 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 CCZ1P86791 482 aaPredicted RBP15.86■□□□□ 0.13
SNPH-203ENST00000614659 PDIA6Q15084 440 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 C6orf118Q5T5N4 469 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 SDCCAG8Q86SQ7 713 aaPredicted RBP15.86■□□□□ 0.13
SNPH-203ENST00000614659 GSDMBQ8TAX9 411 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 SALL3Q9BXA9 1300 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 CLIC2O15247 247 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 IFNB1P01574 187 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 CDC42EP1Q00587 391 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 SNCBQ16143 134 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 TRIM50Q86XT4 487 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 TUBB6Q9BUF5 446 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 KCNF1Q9H3M0 494 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 PLEKHA4Q9H4M7 779 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 HGSO14964 777 aaPredicted RBP15.86■□□□□ 0.13
SNPH-203ENST00000614659 LUC7L3O95232 432 aaKnown RBP15.86■□□□□ 0.13
SNPH-203ENST00000614659 SMARCA1P28370 1054 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 GARSP41250 739 aaKnown RBP15.86■□□□□ 0.13
SNPH-203ENST00000614659 PTPN21Q16825 1174 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 MUM1Q2TAK8 710 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 SESTD1Q86VW0 696 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNPH-203ENST00000614659 USH1CQ9Y6N9 552 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 WDR46O15213 610 aaKnown RBP15.86■□□□□ 0.13
SNPH-203ENST00000614659 ELF1P32519 619 aa15.86■□□□□ 0.13
SNPH-203ENST00000614659 DHX9Q08211 1270 aaKnown RBP15.86■□□□□ 0.13
SNPH-203ENST00000614659 PHLDB3Q6NSJ2 640 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms