RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 GIT2Q14161 759 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 PADI6Q6TGC4 694 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 UNC13DQ70J99 1090 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 PXYLP1Q8TE99 480 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 SH2D3AQ9BRG2 576 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 SMARCAD1Q9H4L7 1026 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 NRBP2Q9NSY0 501 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 KCND2Q9NZV8 630 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 Q9Y3F1 56 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
TMEM254-213ENST00000613758 RHOBTB3O94955 611 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 CNGA1P29973 690 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
TMEM254-213ENST00000613758 TLK2Q86UE8 772 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 TRIM50Q86XT4 487 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 LENG1Q96BZ8 264 aaPredicted RBP15.29■□□□□ 0.04
TMEM254-213ENST00000613758 CEP170P1Q96L14 293 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 AP5M1Q9H0R1 490 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 EXOC1Q9NV70 894 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 PANK4Q9NVE7 773 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 SEPT9Q9UHD8 586 aaPredicted RBP15.29■□□□□ 0.04
TMEM254-213ENST00000613758 CASP8AP2Q9UKL3 1982 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 HMGCRP04035 888 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 CCDC65Q8IXS2 484 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 BPIFA3Q9BQP9 254 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 REEP2Q9BRK0 252 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 TRIM17Q9Y577 477 aa15.29■□□□□ 0.04
TMEM254-213ENST00000613758 A6NJR5 290 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 LGALS2P05162 132 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 MMP3P08254 477 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
TMEM254-213ENST00000613758 SLC26A2P50443 739 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 DGKDQ16760 1214 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 ZNF658Q5TYW1 1059 aaPredicted RBP15.28■□□□□ 0.04
TMEM254-213ENST00000613758 NIFKQ9BYG3 293 aaKnown RBP15.28■□□□□ 0.04
TMEM254-213ENST00000613758 CYP26B1Q9NR63 512 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 WDR81Q562E7 1941 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 SEPT4O43236 478 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 USO1O60763 962 aaKnown RBP15.28■□□□□ 0.04
TMEM254-213ENST00000613758 DUSP11O75319 330 aaKnown RBP15.28■□□□□ 0.04
TMEM254-213ENST00000613758 ADCY5O95622 1261 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 HOXD8P13378 290 aaPredicted RBP15.28■□□□□ 0.04
TMEM254-213ENST00000613758 GUCY2CP25092 1073 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 MARK3P27448 753 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 MLKLQ8NB16 471 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 FAM167AQ96KS9 214 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 ZHX3Q9H4I2 956 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 POLD4Q9HCU8 107 aa15.28■□□□□ 0.04
TMEM254-213ENST00000613758 CCND3P30281 292 aaPredicted RBP15.27■□□□□ 0.04
TMEM254-213ENST00000613758 COASYQ13057 564 aa15.27■□□□□ 0.04
TMEM254-213ENST00000613758 PLCB4Q15147 1175 aa15.27■□□□□ 0.04
TMEM254-213ENST00000613758 MTERF2Q49AM1 385 aa15.27■□□□□ 0.04
TMEM254-213ENST00000613758 ATP8B4Q8TF62 1192 aa15.27■□□□□ 0.04
TMEM254-213ENST00000613758 BBXQ8WY36 941 aaPredicted RBP15.27■□□□□ 0.04
TMEM254-213ENST00000613758 C16orf70Q9BSU1 422 aa15.27■□□□□ 0.04
TMEM254-213ENST00000613758 ERAP1Q9NZ08 941 aa15.27■□□□□ 0.04
TMEM254-213ENST00000613758 GDAQ9Y2T3 454 aa15.27■□□□□ 0.04
TMEM254-213ENST00000613758 MYH9P35579 1960 aaKnown RBP15.27■□□□□ 0.04
TMEM254-213ENST00000613758 FRMD3A2A2Y4 597 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 RSPH10B2B2RC85 870 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 TBCAO75347 108 aaKnown RBP15.26■□□□□ 0.03
TMEM254-213ENST00000613758 RSPH10BP0C881 870 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 ZNF286BP0CG31 522 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 IRX5P78411 483 aaPredicted RBP15.26■□□□□ 0.03
TMEM254-213ENST00000613758 EHHADHQ08426 723 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
TMEM254-213ENST00000613758 MAEAQ7L5Y9 396 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 SMYD4Q8IYR2 804 aaPredicted RBP15.26■□□□□ 0.03
TMEM254-213ENST00000613758 AOPEPQ8N6M6 819 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 SLAIN1Q8ND83 568 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 HPS3Q969F9 1004 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 GTPBP4Q9BZE4 634 aaKnown RBP15.26■□□□□ 0.03
TMEM254-213ENST00000613758 NAT10Q9H0A0 1025 aaKnown RBP15.26■□□□□ 0.03
TMEM254-213ENST00000613758 ODF2LQ9ULJ1 636 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 COL4A3BPQ9Y5P4 624 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 SFI1A8K8P3 1242 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 HIP1RO75146 1068 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 FAM13AO94988 1023 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 CPT1AP50416 773 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 STK4Q13043 487 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 PSMD2Q13200 908 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 NCAPHQ15003 741 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 TARBP2Q15633 366 aaKnown RBP15.26■□□□□ 0.03
TMEM254-213ENST00000613758 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
TMEM254-213ENST00000613758 MAP3K21Q5TCX8 1036 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 RNPEPQ9H4A4 650 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 DACH1Q9UI36 760 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 PTCH2Q9Y6C5 1203 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 LOXHD1Q8IVV2 1947 aa15.26■□□□□ 0.03
TMEM254-213ENST00000613758 RARBP10826 455 aa15.25■□□□□ 0.03
TMEM254-213ENST00000613758 GRK4P32298 578 aa15.25■□□□□ 0.03
TMEM254-213ENST00000613758 BEX3Q00994 111 aa15.25■□□□□ 0.03
TMEM254-213ENST00000613758 TIPINQ9BVW5 301 aa15.25■□□□□ 0.03
TMEM254-213ENST00000613758 SLC39A2Q9NP94 309 aa15.25■□□□□ 0.03
TMEM254-213ENST00000613758 PDLIM7Q9NR12 457 aa15.25■□□□□ 0.03
TMEM254-213ENST00000613758 ZNF215Q9UL58 517 aaPredicted RBP15.25■□□□□ 0.03
TMEM254-213ENST00000613758 TRPC6Q9Y210 931 aa15.25■□□□□ 0.03
TMEM254-213ENST00000613758 PPP1R3GB7ZBB8 358 aa15.25■□□□□ 0.03
TMEM254-213ENST00000613758 H3BRB1 525 aa15.25■□□□□ 0.03
TMEM254-213ENST00000613758 HBP1O60381 514 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms