RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 GOLGA8SH3BPF8 625 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 FGGP02679 453 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 SRGNP10124 158 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 HSPA1LP34931 641 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 CA8P35219 290 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 CEP55Q53EZ4 464 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 GLE1Q53GS7 698 aaKnown RBP9.29□□□□□ -0.92
TMCO1-208ENST00000612311 ANKRD20A3Q5VUR7 823 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 HHIPL2Q6UWX4 724 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 TAB3Q8N5C8 712 aaPredicted RBP9.29□□□□□ -0.92
TMCO1-208ENST00000612311 GIMAP8Q8ND71 665 aaPredicted RBP9.29□□□□□ -0.92
TMCO1-208ENST00000612311 ANKRD36BP1Q96IX9 119 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 FMO2Q99518 471 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 ZNF277Q9NRM2 450 aaPredicted RBP9.29□□□□□ -0.92
TMCO1-208ENST00000612311 INTS9Q9NV88 658 aaKnown RBP9.29□□□□□ -0.92
TMCO1-208ENST00000612311 NXF1Q9UBU9 619 aaKnown RBP9.29□□□□□ -0.92
TMCO1-208ENST00000612311 MYMKA6NI61 221 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 SMARCA1P28370 1054 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 ZNF131P52739 623 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 ATP11AP98196 1134 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 NNTQ13423 1086 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 SEC23AQ15436 765 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 RAD9BQ6WBX8 426 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 FBXL16Q8N461 479 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
TMCO1-208ENST00000612311 RGL1Q9NZL6 768 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 CAPN7Q9Y6W3 813 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 EYA4O95677 639 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 IFNAR2P48551 515 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 TERF2Q15554 542 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 SLFN12LQ6IEE8 588 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 DNAJC24Q6P3W2 148 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 PDXDC1Q6P996 788 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 LDHDQ86WU2 507 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 CCDC125Q86Z20 511 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 MAP7D3Q8IWC1 876 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 PPFIBP2Q8ND30 876 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 CCDC110Q8TBZ0 833 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 STMN2Q93045 179 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 HAUS1Q96CS2 278 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 OSBPL9Q96SU4 736 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 LXNQ9BS40 222 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 KLHL14Q9P2G3 628 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 ESYT2A0FGR8 921 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 I3L4J1 428 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 SLC16A4O15374 487 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 CHRNA5P30532 468 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 LIG3P49916 1009 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 TOB1P50616 345 aaPredicted RBP9.28□□□□□ -0.92
TMCO1-208ENST00000612311 NFRKBQ6P4R8 1299 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 AKT3Q9Y243 479 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 ZHX2Q9Y6X8 837 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 NWD1Q149M9 1564 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 SARNPP82979 210 aaKnown RBP9.28□□□□□ -0.92
TMCO1-208ENST00000612311 DR1Q01658 176 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 DRAP1Q14919 205 aaPredicted RBP9.28□□□□□ -0.92
TMCO1-208ENST00000612311 EPHA7Q15375 998 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 RASGRP2Q7LDG7 609 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 PHLDB2Q86SQ0 1253 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 DPP9Q86TI2 863 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 EXOC8Q8IYI6 725 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 NSUN6Q8TEA1 469 aaKnown RBP9.28□□□□□ -0.92
TMCO1-208ENST00000612311 WRNIP1Q96S55 665 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 SPC25Q9HBM1 224 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 AGPAT5Q9NUQ2 364 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 ADAM21Q9UKJ8 722 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 ARHGAP23Q9P227 1491 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 MIF4GDA9UHW6 222 aaKnown RBP9.28□□□□□ -0.92
TMCO1-208ENST00000612311 H7C0C1 242 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 PDXKO00764 312 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 CAPN9O14815 690 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 TROVE2P10155 538 aaKnown RBP eCLIP9.28□□□□□ -0.92
TMCO1-208ENST00000612311 CD58P19256 250 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 ATP5OP48047 213 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 RWDD2BP57060 319 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 CUL1Q13616 776 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 SNRNP48Q6IEG0 339 aaKnown RBP9.28□□□□□ -0.92
TMCO1-208ENST00000612311 CCDC62Q6P9F0 684 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 ZBTB33Q86T24 672 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 MCUR1Q96AQ8 359 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 MSTO1Q9BUK6 570 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 BAIAP2L1Q9UHR4 511 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 TTLL3Q9Y4R7 772 aa9.28□□□□□ -0.92
TMCO1-208ENST00000612311 NCK2O43639 380 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 ENTPD3O75355 529 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 GYPCP04921 128 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 ATP1A1P05023 1023 aaKnown RBP9.27□□□□□ -0.92
TMCO1-208ENST00000612311 TRIM49P0CI25 452 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 TRIM49CP0CI26 452 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 SRGAP2CP0DJJ0 459 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 CYP4F22Q6NT55 531 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 FRMD5Q7Z6J6 570 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 TXNRD3Q86VQ6 643 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 TRIM50Q86XT4 487 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 RNF169Q8NCN4 708 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 JMJD4Q9H9V9 463 aa9.27□□□□□ -0.92
TMCO1-208ENST00000612311 TCRBV5S4A2TA0A5A2 114 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 DENND3A2RUS2 1198 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 PPP1R3GB7ZBB8 358 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms