RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 ARAP2Q8WZ64 1704 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 GLG1Q92896 1179 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 EBF2Q9HAK2 575 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 RBAK-RBAKDNI3L0D1 243 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 IGF2BP3O00425 579 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDH4-202ENST00000611855 RAD21O60216 631 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 SNUPNO95149 360 aaKnown RBP11.99□□□□□ -0.49
CDH4-202ENST00000611855 KRT18P05783 430 aaKnown RBP11.99□□□□□ -0.49
CDH4-202ENST00000611855 PDHA1P08559 390 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 KCNH2Q12809 1159 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 ADAM9Q13443 819 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 LRRC14Q15048 493 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 TAF11Q15544 211 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 TMEM266Q2M3C6 531 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 CCDC38Q502W7 563 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 ALKBH5Q6P6C2 394 aaKnown RBP11.99□□□□□ -0.49
CDH4-202ENST00000611855 LRIG3Q6UXM1 1119 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 DAGLBQ8NCG7 672 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 CCDC26Q8TAB7 109 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 DYDC1Q8WWB3 177 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 KLHL29Q96CT2 875 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 PRMT1Q99873 361 aaKnown RBP11.99□□□□□ -0.49
CDH4-202ENST00000611855 MLXIPLQ9NP71 852 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 FGGP02679 453 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 GNA11P29992 359 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 PPP1R2P41236 205 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 TRPM8Q7Z2W7 1104 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 U2AF1L4Q8WU68 220 aaKnown RBP11.99□□□□□ -0.49
CDH4-202ENST00000611855 IQCDQ96DY2 449 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 IKZF4Q9H2S9 585 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 OSGEPQ9NPF4 335 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 AJAP1Q9UKB5 411 aaPredicted RBP11.99□□□□□ -0.49
CDH4-202ENST00000611855 TRIM33Q9UPN9 1127 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 KIAA1024Q9UPX6 916 aa11.99□□□□□ -0.49
CDH4-202ENST00000611855 LRP5O75197 1615 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 PVALEFA0A1B0GWK0 134 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 KLHL33A6NCF5 533 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 SMIM24O75264 130 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 USP11P51784 963 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 CDCA2Q69YH5 1023 aaPredicted RBP11.98□□□□□ -0.49
CDH4-202ENST00000611855 AADACL2Q6P093 401 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 TMC3Q7Z5M5 1100 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 LRRC47Q8N1G4 583 aaKnown RBP11.98□□□□□ -0.49
CDH4-202ENST00000611855 ECT2Q9H8V3 914 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 ARHGEF10LQ9HCE6 1279 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 BCS1LQ9Y276 419 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 ZBTB12Q9Y330 459 aaPredicted RBP11.98□□□□□ -0.49
CDH4-202ENST00000611855 C5orf60A6NFR6 353 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 MYBP10242 640 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 STAT3P40763 770 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 CASP5P51878 434 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 PSMD2Q13200 908 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 SEMA3FQ13275 785 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 ITPK1Q13572 414 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 ARMC9Q7Z3E5 817 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 KSR1Q8IVT5 923 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 SLC17A8Q8NDX2 589 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 SCFD2Q8WU76 684 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 OSBPL1AQ9BXW6 950 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 INTS9Q9NV88 658 aaKnown RBP11.98□□□□□ -0.49
CDH4-202ENST00000611855 SEPT11Q9NVA2 429 aaKnown RBP11.98□□□□□ -0.49
CDH4-202ENST00000611855 TMEM59LQ9UK28 342 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 ANKRD36CQ5JPF3 1778 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 SPDYE3A6NKU9 549 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 POTECB2RU33 542 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 SMNDC1O75940 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDH4-202ENST00000611855 GHRP10912 638 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 RASA1P20936 1047 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 NR2F2P24468 414 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 PLTPP55058 493 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 IFI35P80217 286 aaPredicted RBP11.98□□□□□ -0.49
CDH4-202ENST00000611855 CUL1Q13616 776 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 RBM46Q8TBY0 533 aaKnown RBP11.98□□□□□ -0.49
CDH4-202ENST00000611855 DNAJC19Q96DA6 116 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 MTMR9Q96QG7 549 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 EYA3Q99504 573 aa11.98□□□□□ -0.49
CDH4-202ENST00000611855 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDH4-202ENST00000611855 CHORDC1Q9UHD1 332 aaPredicted RBP11.98□□□□□ -0.49
CDH4-202ENST00000611855 SHANK3Q9BYB0 1731 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 F8VZ95 297 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 MEIS1O00470 390 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 EDIL3O43854 480 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 LGR5O75473 907 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 NQO1P15559 274 aaKnown RBP11.97□□□□□ -0.49
CDH4-202ENST00000611855 RWDD2BP57060 319 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 TRIM59Q8IWR1 403 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 FAM129AQ9BZQ8 928 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 NAGPAQ9UK23 515 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 SNX24Q9Y343 169 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 BCL9O00512 1426 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 FOXO6A8MYZ6 492 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 ZCWPW2Q504Y3 356 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 SBK1Q52WX2 424 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 ERMARDQ5T6L9 678 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 FBXO33Q7Z6M2 555 aa11.97□□□□□ -0.49
CDH4-202ENST00000611855 GPBP1Q86WP2 473 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms