RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 HSD17B14Q9BPX1 270 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 ARHGEF10LQ9HCE6 1279 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 GOLGA6AQ9NYA3 693 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 CHMP2AO43633 222 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 GAP43P17677 238 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 TNFRSF8P28908 595 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 NOP2P46087 812 aaKnown RBP18.85■□□□□ 0.61
NEK3-206ENST00000611833 RNASE9P60153 205 aaKnown RBP18.85■□□□□ 0.61
NEK3-206ENST00000611833 MYCT1Q8N699 235 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 TMX2Q9Y320 296 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 SPDYE2BA6NHP3 402 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 SPDYE6P0CI01 402 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 IFI16Q16666 785 aaKnown RBP18.84■□□□□ 0.61
NEK3-206ENST00000611833 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 RUFY1Q96T51 708 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 OLFML3Q9NRN5 406 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 GCNT4Q9P109 453 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 BTNL10A8MVZ5 291 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 HSF2BPO75031 334 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 PSMD10O75832 226 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 SLITRK3O94933 977 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 TRAF1Q13077 416 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 RPS6KA1Q15418 735 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 LRCH2Q5VUJ6 765 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 ALKBH5Q6P6C2 394 aaKnown RBP18.84■□□□□ 0.61
NEK3-206ENST00000611833 VPS36Q86VN1 386 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 KCTD17Q8N5Z5 321 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 SLC35C1Q96A29 364 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 KRT12Q99456 494 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 EPB41L5Q9HCM4 733 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 TMOD2Q9NZR1 351 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 NAGPAQ9UK23 515 aa18.84■□□□□ 0.61
NEK3-206ENST00000611833 C21orf2O43822 256 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 OPA1O60313 960 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 FLOT1O75955 427 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 HEXIM1O94992 359 aaKnown RBP18.83■□□□□ 0.61
NEK3-206ENST00000611833 GLI1P08151 1106 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 UBXN2AP68543 259 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 GUCY2DQ02846 1103 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 LRRC31Q6UY01 552 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.83■□□□□ 0.61
NEK3-206ENST00000611833 RBM46Q8TBY0 533 aaKnown RBP18.83■□□□□ 0.61
NEK3-206ENST00000611833 IFT81Q8WYA0 676 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 CAVIN3Q969G5 261 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 DYDC2Q96IM9 177 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 PLEKHA4Q9H4M7 779 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 TUFT1Q9NNX1 390 aa18.83■□□□□ 0.61
NEK3-206ENST00000611833 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.83■□□□□ 0.61
NEK3-206ENST00000611833 KIF13BQ9NQT8 1826 aa18.83■□□□□ 0.6
NEK3-206ENST00000611833 ZBTB39O15060 712 aa18.83■□□□□ 0.6
NEK3-206ENST00000611833 PPP1R12BO60237 982 aaPredicted RBP18.83■□□□□ 0.6
NEK3-206ENST00000611833 ALS2CLQ60I27 953 aa18.83■□□□□ 0.6
NEK3-206ENST00000611833 IKZF4Q9H2S9 585 aa18.83■□□□□ 0.6
NEK3-206ENST00000611833 GOPCQ9HD26 462 aa18.83■□□□□ 0.6
NEK3-206ENST00000611833 ZBTB21Q9ULJ3 1066 aa18.83■□□□□ 0.6
NEK3-206ENST00000611833 RBBP6Q7Z6E9 1792 aaKnown RBP18.83■□□□□ 0.6
NEK3-206ENST00000611833 GOLGA8KD6RF30 607 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 TULP2O00295 520 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 KCNK3O14649 394 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 TGFB1I1O43294 461 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 NMT1P30419 496 aaKnown RBP18.82■□□□□ 0.6
NEK3-206ENST00000611833 PRKCIP41743 596 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 TSEN2Q8NCE0 465 aaKnown RBP18.82■□□□□ 0.6
NEK3-206ENST00000611833 SUPT20HQ8NEM7 779 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 ZFP91Q96JP5 570 aaPredicted RBP18.82■□□□□ 0.6
NEK3-206ENST00000611833 INPP4AQ96PE3 977 aaPredicted RBP18.82■□□□□ 0.6
NEK3-206ENST00000611833 RANBP17Q9H2T7 1088 aaKnown RBP18.82■□□□□ 0.6
NEK3-206ENST00000611833 GDF3Q9NR23 364 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 FBXL5Q9UKA1 691 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 NFU1Q9UMS0 254 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 PSME4Q14997 1843 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 GCOM1H8Y6P7 765 aaPredicted RBP18.82■□□□□ 0.6
NEK3-206ENST00000611833 EIF3DO15371 548 aaKnown RBP eCLIP18.82■□□□□ 0.6
NEK3-206ENST00000611833 POLR2MP0CAP2 368 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 PSMC2P35998 433 aaKnown RBP18.82■□□□□ 0.6
NEK3-206ENST00000611833 CARSP49589 748 aaKnown RBP18.82■□□□□ 0.6
NEK3-206ENST00000611833 TNNC1P63316 161 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 PPFIA1Q13136 1202 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 PAK2Q13177 524 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 PPP2R5CQ13362 524 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 NNTQ13423 1086 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 C1orf186Q6ZWK4 172 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 FAM186BQ8IYM0 893 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 FAM151AQ8WW52 585 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 SLC5A5Q92911 643 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 SIX2Q9NPC8 291 aa18.82■□□□□ 0.6
NEK3-206ENST00000611833 ZNF70Q9UC06 446 aaPredicted RBP18.82■□□□□ 0.6
NEK3-206ENST00000611833 ZMYM2Q9UBW7 1377 aa18.81■□□□□ 0.6
NEK3-206ENST00000611833 ESYT3A0FGR9 886 aa18.81■□□□□ 0.6
NEK3-206ENST00000611833 ZYXQ15942 572 aaKnown RBP18.81■□□□□ 0.6
NEK3-206ENST00000611833 ZC2HC1CQ53FD0 456 aaPredicted RBP18.81■□□□□ 0.6
NEK3-206ENST00000611833 RSBN1LQ6PCB5 846 aaPredicted RBP18.81■□□□□ 0.6
NEK3-206ENST00000611833 GJB7Q6PEY0 223 aa18.81■□□□□ 0.6
NEK3-206ENST00000611833 DNAAF5Q86Y56 855 aa18.81■□□□□ 0.6
NEK3-206ENST00000611833 CDAN1Q8IWY9 1227 aa18.81■□□□□ 0.6
NEK3-206ENST00000611833 USP38Q8NB14 1042 aa18.81■□□□□ 0.6
NEK3-206ENST00000611833 PARVGQ9HBI0 331 aa18.81■□□□□ 0.6
NEK3-206ENST00000611833 CNTNAP1P78357 1384 aa18.81■□□□□ 0.6
NEK3-206ENST00000611833 ZSCAN5CA6NGD5 496 aaPredicted RBP18.8■□□□□ 0.6
NEK3-206ENST00000611833 GAS7O60861 476 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms