RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ZNF185O15231 689 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 TGFB1I1O43294 461 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 ICAM1P05362 532 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 RSPH10BP0C881 870 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 MAPTP10636 758 aaKnown RBP11.44□□□□□ -0.58
PABPC1-224ENST00000610907 ERCC3P19447 782 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 ALCAMQ13740 583 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 CTTNQ14247 550 aaKnown RBP11.44□□□□□ -0.58
PABPC1-224ENST00000610907 TNIP1Q15025 636 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 CFAP221Q4G0U5 840 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 HSP90B2PQ58FF3 399 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 HS2ST1Q7LGA3 356 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 ZNF720Q7Z2F6 126 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 VPS36Q86VN1 386 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 SPATA4Q8NEY3 305 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 TMEM174Q8WUU8 243 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 LPAR1Q92633 364 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 SLC35C1Q96A29 364 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 BORCS6Q96GS4 357 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 TLR10Q9BXR5 811 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 LOXHD1Q8IVV2 1947 aa11.44□□□□□ -0.58
PABPC1-224ENST00000610907 A0A087X0T9 212 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 CCDC66A2RUB6 948 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 GRID2IPA4D2P6 1211 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 IPO5O00410 1097 aaKnown RBP11.43□□□□□ -0.58
PABPC1-224ENST00000610907 POLR3GO15318 223 aaPredicted RBP11.43□□□□□ -0.58
PABPC1-224ENST00000610907 FAM228BP0C875 321 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 SLC9A1P19634 815 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 AARSP49588 968 aaKnown RBP eCLIP11.43□□□□□ -0.58
PABPC1-224ENST00000610907 NAP1L1P55209 391 aaKnown RBP11.43□□□□□ -0.58
PABPC1-224ENST00000610907 PPP2R5AQ15172 486 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 KIAA0753Q2KHM9 967 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 TAF3Q5VWG9 929 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 SLC9A9Q8IVB4 645 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 NIM1KQ8IY84 436 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 FAM133AQ8N9E0 248 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 PRPF38AQ8NAV1 312 aaKnown RBP11.43□□□□□ -0.58
PABPC1-224ENST00000610907 FAM71BQ8TC56 605 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 PIGOQ8TEQ8 1089 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 SLC16A10Q8TF71 515 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.43□□□□□ -0.58
PABPC1-224ENST00000610907 VEZTQ9HBM0 779 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 PDE11AQ9HCR9 933 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 DMAC2Q9NW81 257 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.43□□□□□ -0.58
PABPC1-224ENST00000610907 ADAMTS1Q9UHI8 967 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 SALL4Q9UJQ4 1053 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 RPTORQ8N122 1335 aa11.43□□□□□ -0.58
PABPC1-224ENST00000610907 WDR46O15213 610 aaKnown RBP11.42□□□□□ -0.58
PABPC1-224ENST00000610907 FLOT1O75955 427 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 CLSTN1O94985 981 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 CCDC172P0C7W6 258 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 FDX1P10109 184 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 FERP16591 822 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 TNFRSF8P28908 595 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 JAM2P57087 298 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 EZH2Q15910 746 aaKnown RBP11.42□□□□□ -0.58
PABPC1-224ENST00000610907 MEI1Q5TIA1 1274 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 FAM178BQ8IXR5 827 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 FAM186BQ8IYM0 893 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 COG1Q8WTW3 980 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 VTI1AQ96AJ9 217 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 FIZ1Q96SL8 496 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 TIPINQ9BVW5 301 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 TMEM39BQ9GZU3 492 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 UNC45AQ9H3U1 944 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 ZNF277Q9NRM2 450 aaPredicted RBP11.42□□□□□ -0.58
PABPC1-224ENST00000610907 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 MYH10P35580 1976 aa11.42□□□□□ -0.58
PABPC1-224ENST00000610907 A0A0A6YYK5 440 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ARHGEF35A5YM69 484 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 H3BQF6 201 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 LYPLA2O95372 231 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 P4HBP07237 508 aaKnown RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ARP10275 920 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 TAL1P17542 331 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 KCNA3P22001 575 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 KLRC1P26715 233 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 STAT1P42224 750 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 SNRPFP62306 86 aaKnown RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 PTK2Q05397 1052 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 TNFAIP1Q13829 316 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 DCAF17Q5H9S7 520 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 TCERG1LQ5VWI1 586 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 NFRKBQ6P4R8 1299 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ANKRD13CQ8N6S4 541 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 LMBR1Q8WVP7 490 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 STRA6Q9BX79 667 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 KIAA1683Q9H0B3 1180 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ZCCHC17Q9NP64 241 aaKnown RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 SIX2Q9NPC8 291 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 DBR1Q9UK59 544 aaKnown RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ADAM21Q9UKJ8 722 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 CCPG1Q9ULG6 757 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ZMYM2Q9UBW7 1377 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 SMCHD1A6NHR9 2005 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 LRRIQ3A6PVS8 624 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 CLIC2O15247 247 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms