RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ZNF131P52739 623 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.02
NEK3-205ENST00000610828 ANGEL2Q5VTE6 544 aaKnown RBP14.96□□□□□ -0.02
NEK3-205ENST00000610828 NIPA1Q7RTP0 329 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 SYN2Q92777 582 aaPredicted RBP14.96□□□□□ -0.02
NEK3-205ENST00000610828 ATG4CQ96DT6 458 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 WNK4Q96J92 1243 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 METTL14Q9HCE5 456 aaKnown RBP14.96□□□□□ -0.02
NEK3-205ENST00000610828 AGO4Q9HCK5 861 aaKnown RBP14.96□□□□□ -0.02
NEK3-205ENST00000610828 JADE2Q9NQC1 790 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 CD2APQ9Y5K6 639 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 UBIAD1Q9Y5Z9 338 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 ZNF541Q9H0D2 1346 aa14.96□□□□□ -0.02
NEK3-205ENST00000610828 VWA5AO00534 786 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 SEC31AO94979 1220 aaKnown RBP14.95□□□□□ -0.02
NEK3-205ENST00000610828 SERPING1P05155 500 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 P4HBP07237 508 aaKnown RBP14.95□□□□□ -0.02
NEK3-205ENST00000610828 ACTN1P12814 892 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 SLC9A1P19634 815 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 BACE1P56817 501 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 PGM5Q15124 567 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 EXOC3L4Q17RC7 722 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 ASTE1Q2TB18 679 aaPredicted RBP14.95□□□□□ -0.02
NEK3-205ENST00000610828 RNF207Q6ZRF8 634 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 MAEAQ7L5Y9 396 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 ZNF720Q7Z2F6 126 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 FAM133AQ8N9E0 248 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 FIZ1Q96SL8 496 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 RMDN3Q96TC7 470 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 PICK1Q9NRD5 415 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 MAP3K20Q9NYL2 800 aaKnown RBP14.95□□□□□ -0.02
NEK3-205ENST00000610828 HIP1RO75146 1068 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 GUCY2CP25092 1073 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 COG2Q14746 738 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 ENOX2Q16206 610 aaKnown RBP14.95□□□□□ -0.02
NEK3-205ENST00000610828 PAPD7Q5XG87 772 aaKnown RBP14.95□□□□□ -0.02
NEK3-205ENST00000610828 STXBP4Q6ZWJ1 553 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 ZNF280CQ8ND82 737 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 GANQ9H2C0 597 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 MLXIPQ9HAP2 919 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 AS3MTQ9HBK9 375 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 ZHX2Q9Y6X8 837 aa14.95□□□□□ -0.02
NEK3-205ENST00000610828 PTPRAP18433 802 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 BMS1Q14692 1282 aaKnown RBP14.94□□□□□ -0.02
NEK3-205ENST00000610828 PADI6Q6TGC4 694 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 HS2ST1Q7LGA3 356 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 TRIM58Q8NG06 486 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 SLC35C1Q96A29 364 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 PRDM10Q9NQV6 1147 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 RIPK3Q9Y572 518 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 CAPN6Q9Y6Q1 641 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 DOCK1Q14185 1865 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 MYH11P35749 1972 aa14.94□□□□□ -0.02
NEK3-205ENST00000610828 ANO9A1A5B4 782 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 TESPA1A2RU30 521 aaPredicted RBP14.93□□□□□ -0.02
NEK3-205ENST00000610828 PPP1R12BO60237 982 aaPredicted RBP14.93□□□□□ -0.02
NEK3-205ENST00000610828 TACC1O75410 805 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 MOCS3O95396 460 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 HMGCS2P54868 508 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 TUBB4BP68371 445 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 TRMT1LQ7Z2T5 733 aaKnown RBP14.93□□□□□ -0.02
NEK3-205ENST00000610828 CAPZA3Q96KX2 299 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 ANKZF1Q9H8Y5 726 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 PXMP2Q9NR77 195 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 TBC1D22BQ9NU19 505 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 LOXHD1Q8IVV2 1947 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 ZRANB2O95218 330 aaKnown RBP eCLIP14.93□□□□□ -0.02
NEK3-205ENST00000610828 RHOXF2BP0C7M4 288 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 UCHL3P15374 230 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 PON1P27169 355 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 PSMC2P35998 433 aaKnown RBP14.93□□□□□ -0.02
NEK3-205ENST00000610828 KLHL30Q0D2K2 578 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 PLS1Q14651 629 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 ASIC2Q16515 512 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 ARHGEF16Q5VV41 709 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 CC2D1AQ6P1N0 951 aaPredicted RBP14.93□□□□□ -0.02
NEK3-205ENST00000610828 CCDC125Q86Z20 511 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 APOBEC3FQ8IUX4 373 aaKnown RBP14.93□□□□□ -0.02
NEK3-205ENST00000610828 FAM186BQ8IYM0 893 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 DAW1Q8N136 415 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 KRT222Q8N1A0 295 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 SAMD3Q8N6K7 520 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 ANKRD13CQ8N6S4 541 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 SPAG5Q96R06 1193 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 RHOXF2Q9BQY4 288 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 PDCD2LQ9BRP1 358 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.93□□□□□ -0.02
NEK3-205ENST00000610828 GBP3Q9H0R5 595 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 PLCB1Q9NQ66 1216 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 RNF146Q9NTX7 359 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 PNMA2Q9UL42 364 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 FHOD1Q9Y613 1164 aa14.93□□□□□ -0.02
NEK3-205ENST00000610828 PNMA6AP0CW24 399 aaPredicted RBP14.92□□□□□ -0.02
NEK3-205ENST00000610828 FDX1P10109 184 aa14.92□□□□□ -0.02
NEK3-205ENST00000610828 QARSP47897 775 aaKnown RBP14.92□□□□□ -0.02
NEK3-205ENST00000610828 CYP2J2P51589 502 aa14.92□□□□□ -0.02
NEK3-205ENST00000610828 MAPK7Q13164 816 aa14.92□□□□□ -0.02
NEK3-205ENST00000610828 KLHDC7AQ5VTJ3 777 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms