RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 MAP3K21Q5TCX8 1036 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 DAW1Q8N136 415 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 RNPEPQ9H4A4 650 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-221ENST00000608903 ANKEF1Q9NU02 776 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 PTCH2Q9Y6C5 1203 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 FRMD3A2A2Y4 597 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 SFI1A8K8P3 1242 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 ZBTB42B2RXF5 422 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 RHOBTB3O94955 611 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 OATP04181 439 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 MYL1P05976 194 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 ZNF286BP0CG31 522 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
CTCFL-221ENST00000608903 HTTP42858 3142 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 SOX10P56693 466 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 BEX3Q00994 111 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 KCNB1Q14721 858 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 PLCB4Q15147 1175 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 XKR9Q5GH70 373 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 UNC13DQ70J99 1090 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 EMSYQ7Z589 1322 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 TLK2Q86UE8 772 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 PDLIM7Q9NR12 457 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 NRBP1Q9UHY1 535 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 TRIM17Q9Y577 477 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 PCDHA2Q9Y5H9 948 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 ARHGEF35A5YM69 484 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 A6NJR5 290 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 GNRH1P01148 92 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 STK4Q13043 487 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 TARBP2Q15633 366 aaKnown RBP12.85□□□□□ -0.35
CTCFL-221ENST00000608903 STX1AQ16623 288 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 XKR3Q5GH77 459 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 MAEAQ7L5Y9 396 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 PLPPR4Q7Z2D5 763 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 ZSCAN30Q86W11 494 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 RAET1EQ8TD07 263 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 BEGAINQ9BUH8 593 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 NIFKQ9BYG3 293 aaKnown RBP12.85□□□□□ -0.35
CTCFL-221ENST00000608903 XPNPEP1Q9NQW7 623 aa12.85□□□□□ -0.35
CTCFL-221ENST00000608903 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-221ENST00000608903 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 PVALEFA0A1B0GWK0 134 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 AP5Z1O43299 807 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 PPFIA4O75335 1185 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 TPM2P07951 284 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 AKR1A1P14550 325 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 IDEP14735 1019 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 COASYQ13057 564 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 FAM160B1Q5W0V3 765 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 TRMT44Q8IYL2 757 aaKnown RBP12.84□□□□□ -0.35
CTCFL-221ENST00000608903 KIAA0895Q8NCT3 520 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 PXYLP1Q8TE99 480 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 KAT2BQ92831 832 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 GLG1Q92896 1179 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 ZBTB10Q96DT7 871 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 CCDC34Q96HJ3 373 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 CEP170P1Q96L14 293 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 CYP26B1Q9NR63 512 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 PANK4Q9NVE7 773 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 ANO10Q9NW15 660 aa12.84□□□□□ -0.35
CTCFL-221ENST00000608903 SEPT4O43236 478 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 USO1O60763 962 aaKnown RBP12.83□□□□□ -0.35
CTCFL-221ENST00000608903 HMGCRP04035 888 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 KCNA4P22459 653 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 CNGA1P29973 690 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 MTERF2Q49AM1 385 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 TRIML1Q8N9V2 468 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 TRAPPC12Q8WVT3 735 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 SMARCAD1Q9H4L7 1026 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 CBX8Q9HC52 389 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 MAPK8IP1Q9UQF2 711 aa12.83□□□□□ -0.35
CTCFL-221ENST00000608903 CENPFP49454 3210 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 HIP1RO75146 1068 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 DUSP11O75319 330 aaKnown RBP12.83□□□□□ -0.36
CTCFL-221ENST00000608903 PGK1P00558 417 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 GUCY2CP25092 1073 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 IQCB1Q15051 598 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 ZNF658Q5TYW1 1059 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-221ENST00000608903 ATP8B4Q8TF62 1192 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 FIZ1Q96SL8 496 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 AZI2Q9H6S1 392 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 SLC39A2Q9NP94 309 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 Q9Y3F1 56 aa12.83□□□□□ -0.36
CTCFL-221ENST00000608903 DKC1O60832 514 aaKnown RBP eCLIP12.82□□□□□ -0.36
CTCFL-221ENST00000608903 INHAP05111 366 aa12.82□□□□□ -0.36
CTCFL-221ENST00000608903 KRT18P05783 430 aaKnown RBP12.82□□□□□ -0.36
CTCFL-221ENST00000608903 PRCPP42785 496 aa12.82□□□□□ -0.36
CTCFL-221ENST00000608903 ZNF131P52739 623 aa12.82□□□□□ -0.36
CTCFL-221ENST00000608903 LRRC41Q15345 812 aa12.82□□□□□ -0.36
CTCFL-221ENST00000608903 HS1BP3Q53T59 392 aa12.82□□□□□ -0.36
CTCFL-221ENST00000608903 OTUD6AQ7L8S5 288 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms