RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 ST18O60284 1047 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 C22orf31O95567 290 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 VTNP04004 478 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 IGFBP4P22692 258 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 CYP3A7P24462 503 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
HDDC2-204ENST00000608295 TMEM266Q2M3C6 531 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 MTERF2Q49AM1 385 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 FBXO47Q5MNV8 452 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 ARID2Q68CP9 1835 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 PLA2G4FQ68DD2 849 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 MOXD1Q6UVY6 613 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 MICALL1Q8N3F8 863 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
HDDC2-204ENST00000608295 MBOAT7Q96N66 472 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 TBC1D32Q96NH3 1257 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
HDDC2-204ENST00000608295 PCDHA2Q9Y5H9 948 aa16.32■□□□□ 0.2
HDDC2-204ENST00000608295 COL1A2P08123 1366 aa16.31■□□□□ 0.2
HDDC2-204ENST00000608295 AMHP03971 560 aa16.31■□□□□ 0.2
HDDC2-204ENST00000608295 GCFC2P16383 781 aaKnown RBP16.31■□□□□ 0.2
HDDC2-204ENST00000608295 CYP4A11Q02928 519 aa16.31■□□□□ 0.2
HDDC2-204ENST00000608295 KIZQ2M2Z5 673 aa16.31■□□□□ 0.2
HDDC2-204ENST00000608295 FAM26DQ5JW98 314 aa16.31■□□□□ 0.2
HDDC2-204ENST00000608295 MAFAQ8NHW3 353 aaPredicted RBP16.31■□□□□ 0.2
HDDC2-204ENST00000608295 ARNTL2Q8WYA1 636 aa16.31■□□□□ 0.2
HDDC2-204ENST00000608295 TNPO1Q92973 898 aaKnown RBP16.31■□□□□ 0.2
HDDC2-204ENST00000608295 AGO3Q9H9G7 860 aaKnown RBP16.31■□□□□ 0.2
HDDC2-204ENST00000608295 KCNMB3Q9NPA1 279 aa16.31■□□□□ 0.2
HDDC2-204ENST00000608295 VAV3Q9UKW4 847 aa16.31■□□□□ 0.2
HDDC2-204ENST00000608295 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.3■□□□□ 0.2
HDDC2-204ENST00000608295 EPOPA6NHQ4 379 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 SFNP31947 248 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 MCM7P33993 719 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 SAFBQ15424 915 aaKnown RBP eCLIP16.3■□□□□ 0.2
HDDC2-204ENST00000608295 ZNF484Q5JVG2 852 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 IER5Q5VY09 327 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 HAS1Q92839 578 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 FAM167AQ96KS9 214 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 SCLT1Q96NL6 688 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
HDDC2-204ENST00000608295 OSMRQ99650 979 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 LLPHQ9BRT6 129 aaKnown RBP16.3■□□□□ 0.2
HDDC2-204ENST00000608295 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 CDHR5Q9HBB8 845 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 AKT3Q9Y243 479 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 COL6A3P12111 3177 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 NLRC5Q86WI3 1866 aa16.3■□□□□ 0.2
HDDC2-204ENST00000608295 CHD9Q3L8U1 2897 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 SMIM35A0A1B0GVV1 85 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 NEMFO60524 1076 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 GJB5O95377 273 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 HMGN5P82970 282 aaKnown RBP16.29■□□□□ 0.2
HDDC2-204ENST00000608295 PAK2Q13177 524 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 NBR1Q14596 966 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 CCDC85BQ15834 202 aaPredicted RBP16.29■□□□□ 0.2
HDDC2-204ENST00000608295 CALCRLQ16602 461 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 PPP4R3AQ6IN85 833 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 TSHZ1Q6ZSZ6 1077 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 GDPD5Q8WTR4 605 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 TMEM40Q8WWA1 233 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 TMX3Q96JJ7 454 aa16.29■□□□□ 0.2
HDDC2-204ENST00000608295 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
HDDC2-204ENST00000608295 DDX11L8A8MPP1 907 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 EFCAB14O75071 495 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 TAP1Q03518 808 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 TBC1D8BQ0IIM8 1120 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 NFX1Q12986 1120 aaKnown RBP16.28■□□□□ 0.2
HDDC2-204ENST00000608295 DRP2Q13474 957 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
HDDC2-204ENST00000608295 EFCAB12Q6NXP0 572 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 B3GNT9Q6UX72 402 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 RPAINQ86UA6 219 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 USP38Q8NB14 1042 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 LINC01599Q8WXQ3 324 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 DYDC2Q96IM9 177 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 YME1L1Q96TA2 773 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 NAP1L4Q99733 375 aaKnown RBP16.28■□□□□ 0.2
HDDC2-204ENST00000608295 NRBP2Q9NSY0 501 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 RGL1Q9NZL6 768 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 WRAP73Q9P2S5 460 aaPredicted RBP16.28■□□□□ 0.2
HDDC2-204ENST00000608295 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
HDDC2-204ENST00000608295 KIAA1671Q9BY89 1806 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 POTEMA6NI47 508 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 CSPG5O95196 566 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 TXKP42681 527 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 PPP2R5CQ13362 524 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
HDDC2-204ENST00000608295 RDM1Q8NG50 284 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 APBB2Q92870 758 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 FAM20AQ96MK3 541 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 MAP7D2Q96T17 732 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 LXNQ9BS40 222 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 TMEM60Q9H2L4 133 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 PADI3Q9ULW8 664 aa16.27■□□□□ 0.2
HDDC2-204ENST00000608295 NOC2LQ9Y3T9 749 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms