RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 CCDC47Q96A33 483 aaKnown RBP18.35■□□□□ 0.53
PMF1-206ENST00000606952 BPIFA3Q9BQP9 254 aa18.35■□□□□ 0.53
PMF1-206ENST00000606952 C16orf70Q9BSU1 422 aa18.35■□□□□ 0.53
PMF1-206ENST00000606952 PDLIM7Q9NR12 457 aa18.35■□□□□ 0.53
PMF1-206ENST00000606952 SSBP05455 408 aaKnown RBP eCLIP18.34■□□□□ 0.534e-6■□□□□ 10.9
PMF1-206ENST00000606952 PTGS1P23219 599 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 GJA9P57773 515 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 MAPK7Q13164 816 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 PSMD2Q13200 908 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 DHX8Q14562 1220 aaKnown RBP18.34■□□□□ 0.53
PMF1-206ENST00000606952 DPCR1Q3MIW9 517 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 PADI6Q6TGC4 694 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 CCDC65Q8IXS2 484 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 RAET1EQ8TD07 263 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 REEP2Q9BRK0 252 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 CYP26B1Q9NR63 512 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 EXOC1Q9NV70 894 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 ERAP1Q9NZ08 941 aa18.34■□□□□ 0.53
PMF1-206ENST00000606952 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.33■□□□□ 0.52
PMF1-206ENST00000606952 BIN1O00499 593 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 DGAT1O75907 488 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 ELNP15502 786 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 GAP43P17677 238 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 TRIM32Q13049 653 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 COASYQ13057 564 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 GSE1Q14687 1217 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 PLCB4Q15147 1175 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 DGKDQ16760 1214 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 ANO6Q4KMQ2 910 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 XKR9Q5GH70 373 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 DYMQ7RTS9 669 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 FAM200AQ8TCP9 573 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 OLFML3Q9NRN5 406 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 NRBP2Q9NSY0 501 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 SEL1LQ9UBV2 794 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 SEPT9Q9UHD8 586 aaPredicted RBP18.33■□□□□ 0.52
PMF1-206ENST00000606952 PCDHA2Q9Y5H9 948 aa18.33■□□□□ 0.52
PMF1-206ENST00000606952 COL1A2P08123 1366 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 SCN10AQ9Y5Y9 1956 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 DYNC1LI2O43237 492 aaPredicted RBP18.32■□□□□ 0.52
PMF1-206ENST00000606952 HBP1O60381 514 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 F2P00734 622 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
PMF1-206ENST00000606952 CST5P28325 142 aaPredicted RBP18.32■□□□□ 0.52
PMF1-206ENST00000606952 RFC5P40937 340 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 PPP1R2P41236 205 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 CPT1AP50416 773 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 NPEPPSP55786 919 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 UTP14CQ5TAP6 766 aaKnown RBP18.32■□□□□ 0.52
PMF1-206ENST00000606952 PLA2G4FQ68DD2 849 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 C11orf57Q6ZUT1 292 aaPredicted RBP18.32■□□□□ 0.52
PMF1-206ENST00000606952 TRIM50Q86XT4 487 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 DAW1Q8N136 415 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 KCNN1Q92952 543 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 CEP170P1Q96L14 293 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 DNAJC25Q9H1X3 360 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 DHX33Q9H6R0 707 aaKnown RBP18.32■□□□□ 0.52
PMF1-206ENST00000606952 PANK4Q9NVE7 773 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 DACH1Q9UI36 760 aa18.32■□□□□ 0.52
PMF1-206ENST00000606952 ZNF215Q9UL58 517 aaPredicted RBP18.32■□□□□ 0.52
PMF1-206ENST00000606952 NPHP3-ACAD11A0A0J9YXS1 232 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 TMEM150BA6NC51 233 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 ZBTB42B2RXF5 422 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 ERCC5P28715 1186 aaPredicted RBP18.31■□□□□ 0.52
PMF1-206ENST00000606952 RTP1P59025 263 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 BRDTQ58F21 947 aaPredicted RBP18.31■□□□□ 0.52
PMF1-206ENST00000606952 KIAA0895Q8NCT3 520 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 MCPH1Q8NEM0 835 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 GLG1Q92896 1179 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 CCDC43Q96MW1 224 aaKnown RBP18.31■□□□□ 0.52
PMF1-206ENST00000606952 AP5M1Q9H0R1 490 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 XPNPEP1Q9NQW7 623 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 COL4A3BPQ9Y5P4 624 aa18.31■□□□□ 0.52
PMF1-206ENST00000606952 SYNRGQ9UMZ2 1314 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 PPP1R3GB7ZBB8 358 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 HAS3O00219 553 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 GAS2O43903 313 aaKnown RBP18.3■□□□□ 0.52
PMF1-206ENST00000606952 MSCO60682 206 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 KPNA6O60684 536 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 USO1O60763 962 aaKnown RBP18.3■□□□□ 0.52
PMF1-206ENST00000606952 ADAMTS4O75173 837 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 KRT18P05783 430 aaKnown RBP18.3■□□□□ 0.52
PMF1-206ENST00000606952 MAPTP10636 758 aaKnown RBP18.3■□□□□ 0.52
PMF1-206ENST00000606952 HSPA8P11142 646 aaKnown RBP18.3■□□□□ 0.52
PMF1-206ENST00000606952 IDEP14735 1019 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 CCND3P30281 292 aaPredicted RBP18.3■□□□□ 0.52
PMF1-206ENST00000606952 GRK4P32298 578 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 IQCB1Q15051 598 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 FAM26FQ5R3K3 315 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 FOXR2Q6PJQ5 311 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 EXOC8Q8IYI6 725 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 LENG1Q96BZ8 264 aaPredicted RBP18.3■□□□□ 0.52
PMF1-206ENST00000606952 FIZ1Q96SL8 496 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 NAT10Q9H0A0 1025 aaKnown RBP18.3■□□□□ 0.52
PMF1-206ENST00000606952 C17orf75Q9HAS0 396 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 ATP6V0A4Q9HBG4 840 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 PARVGQ9HBI0 331 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 PTPN22Q9Y2R2 807 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 GDAQ9Y2T3 454 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms