RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 KNOP1Q1ED39 458 aaKnown RBP23.85■■□□□ 1.41
USP6NL-204ENST00000606752 SPECC1LQ69YQ0 1117 aa23.85■■□□□ 1.41
USP6NL-204ENST00000606752 PPP4R3CPQ6ZMV5 832 aa23.85■■□□□ 1.41
USP6NL-204ENST00000606752 TRMT1LQ7Z2T5 733 aaKnown RBP23.85■■□□□ 1.41
USP6NL-204ENST00000606752 LRRC8AQ8IWT6 810 aa23.85■■□□□ 1.41
USP6NL-204ENST00000606752 CACTINQ8WUQ7 758 aaKnown RBP23.85■■□□□ 1.41
USP6NL-204ENST00000606752 MAFBQ9Y5Q3 323 aaPredicted RBP23.85■■□□□ 1.41
USP6NL-204ENST00000606752 ZNFX1Q9P2E3 1918 aaKnown RBP23.85■■□□□ 1.41
USP6NL-204ENST00000606752 IGSF9BQ9UPX0 1349 aa23.85■■□□□ 1.41
USP6NL-204ENST00000606752 IGKV6D-21A0A0A0MT36 114 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 EIF3DO15371 548 aaKnown RBP eCLIP23.84■■□□□ 1.41
USP6NL-204ENST00000606752 ARIH2O95376 493 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 GGPS1O95749 300 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 ODR4Q5SWX8 454 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 PLA2G4FQ68DD2 849 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 ARMCX2Q7L311 632 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 PLEKHH3Q7Z736 793 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 ZNF467Q7Z7K2 595 aaPredicted RBP23.84■■□□□ 1.41
USP6NL-204ENST00000606752 FAM178BQ8IXR5 827 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 CNOT6LQ96LI5 555 aaKnown RBP23.84■■□□□ 1.41
USP6NL-204ENST00000606752 FIZ1Q96SL8 496 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 SH2D3AQ9BRG2 576 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 MLXIPQ9HAP2 919 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 ZNF302Q9NR11 478 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 KIF3CO14782 793 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 PRPF6O94906 941 aaKnown RBP23.84■■□□□ 1.41
USP6NL-204ENST00000606752 PBX1P40424 430 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 GRB14Q14449 540 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 XKR3Q5GH77 459 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 CCDC62Q6P9F0 684 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 LRRC55Q6ZSA7 311 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 ZNF720Q7Z2F6 126 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 FBXO16Q8IX29 292 aaPredicted RBP23.84■■□□□ 1.41
USP6NL-204ENST00000606752 SMC1BQ8NDV3 1235 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 SEPT1Q8WYJ6 367 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 CCDC102AQ96A19 550 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 CEP170P1Q96L14 293 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 LARSQ9P2J5 1176 aaKnown RBP23.84■■□□□ 1.41
USP6NL-204ENST00000606752 CPA4Q9UI42 421 aa23.84■■□□□ 1.41
USP6NL-204ENST00000606752 ADGRA2Q96PE1 1338 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 GSTTP1A0A1W2PQM5 241 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 NMT1P30419 496 aaKnown RBP23.83■■□□□ 1.41
USP6NL-204ENST00000606752 HOXD13P35453 343 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 PRKCEQ02156 737 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 ARID5BQ14865 1188 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 TAF1CQ15572 869 aaPredicted RBP23.83■■□□□ 1.41
USP6NL-204ENST00000606752 PTPN21Q16825 1174 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 EDRF1Q3B7T1 1238 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 STXBP4Q6ZWJ1 553 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 MAEAQ7L5Y9 396 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 IFNL1Q8IU54 200 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 TUBGCP2Q9BSJ2 902 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 TRAF3IP3Q9Y228 551 aa23.83■■□□□ 1.41
USP6NL-204ENST00000606752 DIS3Q9Y2L1 958 aaKnown RBP23.83■■□□□ 1.41
USP6NL-204ENST00000606752 TPM2P07951 284 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 TBX2Q13207 712 aaPredicted RBP23.82■■□□□ 1.4
USP6NL-204ENST00000606752 CELF3Q5SZQ8 465 aaKnown RBP23.82■■□□□ 1.4
USP6NL-204ENST00000606752 DPP9Q86TI2 863 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 CCDC150Q8NCX0 1101 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 DRC1Q96MC2 740 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 CEP63Q96MT8 703 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 FAM155AB1AL88 458 aaPredicted RBP23.82■■□□□ 1.4
USP6NL-204ENST00000606752 PDXKO00764 312 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 MAPTP10636 758 aaKnown RBP23.82■■□□□ 1.4
USP6NL-204ENST00000606752 MTIF2P46199 727 aaKnown RBP23.82■■□□□ 1.4
USP6NL-204ENST00000606752 LRMPQ12912 555 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 SCFD2Q8WU76 684 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 PCDHB13Q9Y5F0 798 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 LRRC37A2A6NM11 1700 aa23.82■■□□□ 1.4
USP6NL-204ENST00000606752 DOCK5Q9H7D0 1870 aa23.81■■□□□ 1.4
USP6NL-204ENST00000606752 LGALS16A8MUM7 142 aa23.81■■□□□ 1.4
USP6NL-204ENST00000606752 PLS3P13797 630 aa23.81■■□□□ 1.4
USP6NL-204ENST00000606752 TTLL4Q14679 1199 aa23.81■■□□□ 1.4
USP6NL-204ENST00000606752 SEPT9Q9UHD8 586 aaPredicted RBP23.81■■□□□ 1.4
USP6NL-204ENST00000606752 SLC15A5A6NIM6 579 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 TXNP10599 105 aaKnown RBP23.8■■□□□ 1.4
USP6NL-204ENST00000606752 PRKCSHP14314 528 aaPredicted RBP23.8■■□□□ 1.4
USP6NL-204ENST00000606752 ATP4AP20648 1035 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 SFPQP23246 707 aaKnown RBP eCLIP23.8■■□□□ 1.4
USP6NL-204ENST00000606752 ARMCX5Q6P1M9 558 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 MAMDC4Q6UXC1 1216 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 ZC3H3Q8IXZ2 948 aaKnown RBP23.8■■□□□ 1.4
USP6NL-204ENST00000606752 DHX37Q8IY37 1157 aaKnown RBP23.8■■□□□ 1.4
USP6NL-204ENST00000606752 PCYT2Q99447 389 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 VTA1Q9NP79 307 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 CYP26B1Q9NR63 512 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 PDGFCQ9NRA1 345 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 TYW1Q9NV66 732 aaKnown RBP23.8■■□□□ 1.4
USP6NL-204ENST00000606752 ABT1Q9ULW3 272 aaKnown RBP23.8■■□□□ 1.4
USP6NL-204ENST00000606752 UBE4BO95155 1302 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 CALUO43852 315 aaPredicted RBP23.8■■□□□ 1.4
USP6NL-204ENST00000606752 DGAT1O75907 488 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 UBXN1Q04323 297 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 SREBF2Q12772 1141 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 FAM160B1Q5W0V3 765 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 AFAP1L1Q8TED9 768 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 STRA6Q9BX79 667 aa23.8■■□□□ 1.4
USP6NL-204ENST00000606752 ITIH6Q6UXX5 1313 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 TLR2O60603 784 aa23.79■■□□□ 1.4
USP6NL-204ENST00000606752 GNA14O95837 355 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms