RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 P2RX5Q93086 422 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 SELENOSQ9BQE4 189 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 FAM129AQ9BZQ8 928 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 YIPF3Q9GZM5 350 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 ALG2Q9H553 416 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 MMRN2Q9H8L6 949 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 INCENPQ9NQS7 918 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 FAM207AQ9NSI2 230 aaPredicted RBP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 CORO1CQ9ULV4 474 aaPredicted RBP7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 SLC12A4Q9UP95 1085 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 TMEM94Q12767 1356 aa7.04□□□□□ -1.28
SRGAP2-211ENST00000604423 LRRC53A6NM62 1247 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 PPIP5K2O43314 1243 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 MBD4O95243 580 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 FGFR1OPO95684 399 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 FTCDO95954 541 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 DRD4P21917 467 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 CCND1P24385 295 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 CCNE1P24864 410 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 HNRNPH3P31942 346 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 PRPHP41219 470 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 SLC1A4P43007 532 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 RNASE9P60153 205 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 ATP11AP98196 1134 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 GFPT1Q06210 699 aaPredicted RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 BYSLQ13895 437 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 ALX1Q15699 326 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 FAM133BQ5BKY9 247 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 EARS2Q5JPH6 523 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 MIS18BP1Q6P0N0 1132 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 PIK3AP1Q6ZUJ8 805 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 LRP10Q7Z4F1 713 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 CATIPQ7Z7H3 387 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 CCDC84Q86UT8 332 aaPredicted RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 GIMAP8Q8ND71 665 aaPredicted RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 MTMR8Q96EF0 704 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 XPO6Q96QU8 1125 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 MTA3Q9BTC8 594 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 COL25A1Q9BXS0 654 aaPredicted RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 GRIP2Q9C0E4 1043 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 FBXL5Q9UKA1 691 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 SLC4A4Q9Y6R1 1079 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 MYH4Q9Y623 1939 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 AHCYL1O43865 530 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 DIAPH2O60879 1101 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 RHOBTB3O94955 611 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 MMEP08473 750 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 UBA7P41226 1012 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 EIF3BP55884 814 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 NLRP5P59047 1200 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 KRT76Q01546 638 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 IFIT5Q13325 482 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 TCIRG1Q13488 830 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 NCOA4Q13772 614 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 SLC9C1Q4G0N8 1177 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 CCDC38Q502W7 563 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 ARL6IP4Q66PJ3 421 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 NBPF10Q6P3W6 841 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 SLC30A9Q6PML9 568 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 ZSCAN29Q8IWY8 852 aaPredicted RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 NBPF15Q8N660 670 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 USP38Q8NB14 1042 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 ZSCAN1Q8NBB4 408 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 AGAP11Q8TF27 550 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 EEF2KMTQ96G04 330 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 ACSBG1Q96GR2 724 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 IFT74Q96LB3 600 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 STRBPQ96SI9 672 aaKnown RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 ZSCAN10Q96SZ4 725 aaPredicted RBP7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 OSBPL1AQ9BXW6 950 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 L3MBTL1Q9Y468 752 aa7.03□□□□□ -1.28
SRGAP2-211ENST00000604423 CASZ1Q86V15 1759 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 TNKSO95271 1327 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 AFF2P51816 1311 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 SSU72P8A0A1W2PR75 194 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 hCG_1642624A0A1W2PR95 340 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 RASSF10A6NK89 507 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 GPR25O00155 361 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 KCNK3O14649 394 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 ASAP2O43150 1006 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 PRPF3O43395 683 aaKnown RBP7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 VIMP08670 466 aaKnown RBP7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 NQO1P15559 274 aaKnown RBP7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 ATP2A2P16615 1042 aaKnown RBP7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 TATP17735 454 aaPredicted RBP7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 GNAT2P19087 354 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 LTKP29376 864 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 INHBEP58166 350 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 EHHADHQ08426 723 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 MAP3K12Q12852 859 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 MAP7D1Q3KQU3 841 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 VWA3BQ502W6 1294 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 RNFT1Q5M7Z0 435 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 TMEM214Q6NUQ4 689 aaKnown RBP7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 DTHD1Q6ZMT9 781 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 TRPM8Q7Z2W7 1104 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 STAG2Q8N3U4 1231 aa7.02□□□□□ -1.29
SRGAP2-211ENST00000604423 TEX9Q8N6V9 391 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms