RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 HERC6Q8IVU3 1022 aa27.23■■□□□ 1.95
UBE2E3-213ENST00000602959 APBB2Q92870 758 aa27.23■■□□□ 1.95
UBE2E3-213ENST00000602959 FAM161BQ96MY7 647 aa27.23■■□□□ 1.95
UBE2E3-213ENST00000602959 GUCD1Q96NT3 240 aa27.23■■□□□ 1.95
UBE2E3-213ENST00000602959 IFIH1Q9BYX4 1025 aaKnown RBP27.23■■□□□ 1.95
UBE2E3-213ENST00000602959 TRPV2Q9Y5S1 764 aa27.23■■□□□ 1.95
UBE2E3-213ENST00000602959 SQORQ9Y6N5 450 aa27.23■■□□□ 1.95
UBE2E3-213ENST00000602959 GHRP10912 638 aa27.22■■□□□ 1.95
UBE2E3-213ENST00000602959 DEFB103AP81534 67 aa27.22■■□□□ 1.95
UBE2E3-213ENST00000602959 LPIN1Q14693 890 aa27.22■■□□□ 1.95
UBE2E3-213ENST00000602959 CALCRLQ16602 461 aa27.22■■□□□ 1.95
UBE2E3-213ENST00000602959 XKR3Q5GH77 459 aa27.22■■□□□ 1.95
UBE2E3-213ENST00000602959 NOSTRINQ8IVI9 506 aa27.22■■□□□ 1.95
UBE2E3-213ENST00000602959 KIAA0319LQ8IZA0 1049 aa27.22■■□□□ 1.95
UBE2E3-213ENST00000602959 KIF28PB7ZC32 967 aa27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 M0QZ92 97 aa27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 MAGEB2O15479 319 aa27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 STBD1O95210 358 aa27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 U2AF2P26368 475 aaKnown RBP eCLIP27.21■■□□□ 1.955e-7■■□□□ 11.8
UBE2E3-213ENST00000602959 PSMC5P62195 406 aa27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 ORC2Q13416 577 aaPredicted RBP27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 TSHZ1Q6ZSZ6 1077 aa27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 BANK1Q8NDB2 785 aa27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 NIFKQ9BYG3 293 aaKnown RBP27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 ZNF576Q9H609 170 aa27.21■■□□□ 1.95
UBE2E3-213ENST00000602959 TMEM62Q0P6H9 643 aa27.2■■□□□ 1.94
UBE2E3-213ENST00000602959 GNL2Q13823 731 aaKnown RBP27.2■■□□□ 1.94
UBE2E3-213ENST00000602959 EPHA7Q15375 998 aa27.2■■□□□ 1.94
UBE2E3-213ENST00000602959 TARBP2Q15633 366 aaKnown RBP27.2■■□□□ 1.94
UBE2E3-213ENST00000602959 LINC01465Q8N7H1 131 aa27.2■■□□□ 1.94
UBE2E3-213ENST00000602959 MTMR9Q96QG7 549 aa27.2■■□□□ 1.94
UBE2E3-213ENST00000602959 CELF4Q9BZC1 486 aaKnown RBP27.2■■□□□ 1.94
UBE2E3-213ENST00000602959 NKX2-4Q9H2Z4 354 aa27.2■■□□□ 1.94
UBE2E3-213ENST00000602959 P4HBP07237 508 aaKnown RBP27.19■■□□□ 1.94
UBE2E3-213ENST00000602959 GJB2P29033 226 aa27.19■■□□□ 1.94
UBE2E3-213ENST00000602959 QARSP47897 775 aaKnown RBP27.19■■□□□ 1.94
UBE2E3-213ENST00000602959 TRAPPC10P48553 1259 aa27.19■■□□□ 1.94
UBE2E3-213ENST00000602959 USP38Q8NB14 1042 aa27.19■■□□□ 1.94
UBE2E3-213ENST00000602959 SEPT9Q9UHD8 586 aaPredicted RBP27.19■■□□□ 1.94
UBE2E3-213ENST00000602959 CHD7Q9P2D1 2997 aa27.19■■□□□ 1.94
UBE2E3-213ENST00000602959 MYO9BQ13459 2157 aa27.19■■□□□ 1.94
UBE2E3-213ENST00000602959 DKC1O60832 514 aaKnown RBP eCLIP27.18■■□□□ 1.94
UBE2E3-213ENST00000602959 MYOGP15173 224 aa27.18■■□□□ 1.94
UBE2E3-213ENST00000602959 MCM7P33993 719 aa27.18■■□□□ 1.94
UBE2E3-213ENST00000602959 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.18■■□□□ 1.94
UBE2E3-213ENST00000602959 METTL13Q8N6R0 699 aa27.18■■□□□ 1.94
UBE2E3-213ENST00000602959 SLC28A3Q9HAS3 691 aa27.18■■□□□ 1.94
UBE2E3-213ENST00000602959 PCDHA12Q9UN75 941 aa27.18■■□□□ 1.94
UBE2E3-213ENST00000602959 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.18■■□□□ 1.94
UBE2E3-213ENST00000602959 GJB5O95377 273 aa27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 AMHP03971 560 aa27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 ATP2B1P20020 1258 aa27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 NCAPH2Q6IBW4 605 aa27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 ANO5Q75V66 913 aa27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 CEP89Q96ST8 783 aa27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 CDX2Q99626 313 aaPredicted RBP27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 TMEM60Q9H2L4 133 aa27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 TTC12Q9H892 705 aaPredicted RBP27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 AGO3Q9H9G7 860 aaKnown RBP27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 STXBP5LQ9Y2K9 1186 aa27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 COL6A3P12111 3177 aa27.17■■□□□ 1.94
UBE2E3-213ENST00000602959 ARID2Q68CP9 1835 aa27.16■■□□□ 1.94
UBE2E3-213ENST00000602959 TBC1D8BQ0IIM8 1120 aa27.16■■□□□ 1.94
UBE2E3-213ENST00000602959 CUL4AQ13619 759 aa27.16■■□□□ 1.94
UBE2E3-213ENST00000602959 EFCAB12Q6NXP0 572 aa27.16■■□□□ 1.94
UBE2E3-213ENST00000602959 TMCO2Q7Z6W1 182 aaPredicted RBP27.16■■□□□ 1.94
UBE2E3-213ENST00000602959 LXNQ9BS40 222 aa27.16■■□□□ 1.94
UBE2E3-213ENST00000602959 WRAP73Q9P2S5 460 aaPredicted RBP27.16■■□□□ 1.94
UBE2E3-213ENST00000602959 NOL7Q9UMY1 257 aaKnown RBP27.16■■□□□ 1.94
UBE2E3-213ENST00000602959 SMC3Q9UQE7 1217 aa27.16■■□□□ 1.94
UBE2E3-213ENST00000602959 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 TMEM150BA6NC51 233 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 TLL1O43897 1013 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 CA3P07451 260 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 TMOD1P28289 359 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 CD52P31358 61 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 TXKP42681 527 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 CLCN3P51790 818 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 GRIN2CQ14957 1233 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 MTERF2Q49AM1 385 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 TTC38Q5R3I4 469 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 PPP2R2DQ66LE6 453 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 C4orf19Q8IY42 314 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 MAP7D2Q96T17 732 aa27.15■■□□□ 1.94
UBE2E3-213ENST00000602959 DDX11L8A8MPP1 907 aa27.14■■□□□ 1.94
UBE2E3-213ENST00000602959 MYOCDQ8IZQ8 938 aa27.14■■□□□ 1.94
UBE2E3-213ENST00000602959 ZNF710Q8N1W2 664 aa27.14■■□□□ 1.94
UBE2E3-213ENST00000602959 LRRC71Q8N4P6 559 aa27.14■■□□□ 1.94
UBE2E3-213ENST00000602959 DYDC2Q96IM9 177 aa27.14■■□□□ 1.94
UBE2E3-213ENST00000602959 RGL1Q9NZL6 768 aa27.14■■□□□ 1.94
UBE2E3-213ENST00000602959 TTC3P53804 2025 aa27.13■■□□□ 1.93
UBE2E3-213ENST00000602959 IGKV6-21A0A0C4DH24 114 aa27.13■■□□□ 1.93
UBE2E3-213ENST00000602959 GPR32O75388 356 aa27.13■■□□□ 1.93
UBE2E3-213ENST00000602959 VTNP04004 478 aa27.13■■□□□ 1.93
UBE2E3-213ENST00000602959 CRYBB1P53674 252 aaPredicted RBP27.13■■□□□ 1.93
UBE2E3-213ENST00000602959 ZNF174Q15697 407 aa27.13■■□□□ 1.93
UBE2E3-213ENST00000602959 FAM43BQ6ZT52 329 aaPredicted RBP27.13■■□□□ 1.93
UBE2E3-213ENST00000602959 NEK9Q8TD19 979 aa27.13■■□□□ 1.93
UBE2E3-213ENST00000602959 RAD9AQ99638 391 aa27.13■■□□□ 1.93
UBE2E3-213ENST00000602959 EIF2AK1Q9BQI3 630 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms