RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ANGEL2Q5VTE6 544 aaKnown RBP16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 PPP1R12CQ9BZL4 782 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 RPS6KL1Q9Y6S9 549 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 PPP6R2O75170 966 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 GNA11P29992 359 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 IL17AQ16552 155 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 TTC26A0AVF1 554 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 USO1O60763 962 aaKnown RBP16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 STAT3P40763 770 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 ENOX2Q16206 610 aaKnown RBP16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 PRR16Q569H4 304 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 EAPPQ56P03 285 aaPredicted RBP16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 KIAA1755Q5JYT7 1200 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 PAPD7Q5XG87 772 aaKnown RBP16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 UBLCP1Q8WVY7 318 aaPredicted RBP16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 PANK4Q9NVE7 773 aa16.73■□□□□ 0.27
PPFIA3-206ENST00000602655 ERCC5P28715 1186 aaPredicted RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 CUL4BQ13620 913 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 MORC3Q14149 939 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 CYP2W1Q8TAV3 490 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 DHX36Q9H2U1 1008 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 NOVA2Q9UNW9 492 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 REXO2Q9Y3B8 237 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 MEIS1O00470 390 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 SRPRBQ9Y5M8 271 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 LY75O60449 1722 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 NCK2O43639 380 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 VIMP08670 466 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 EPB41P11171 864 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 COPB1P53618 953 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 SPP2Q13103 211 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 MAGEC3Q8TD91 643 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 PRCCQ92733 491 aaPredicted RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 HACL1Q9UJ83 578 aa16.72■□□□□ 0.27
PPFIA3-206ENST00000602655 SMIM23A6NLE4 172 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 HMGB1P1B2RPK0 211 aaPredicted RBP16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 SLC37A4O43826 429 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 BMP3P12645 472 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 WDR78Q5VTH9 848 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 KLHL7Q8IXQ5 586 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 CCDC197Q8NCU1 140 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 CCDC42Q96M95 316 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 SELENOSQ9BQE4 189 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 CCDC113Q9H0I3 377 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 SWAP70Q9UH65 585 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 MGRN1O60291 552 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 SMNDC1O75940 238 aaKnown RBP eCLIP16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 MOCS3O95396 460 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 SETSIPP0DME0 302 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 CD44P16070 742 aaKnown RBP16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 CTNNA1P35221 906 aaKnown RBP16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 TBC1D25Q3MII6 688 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 KRT26Q7Z3Y9 468 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 DEFB129Q9H1M3 183 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 TCP11L1Q9NUJ3 509 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 GDAQ9Y2T3 454 aa16.71■□□□□ 0.27
PPFIA3-206ENST00000602655 SNED1Q8TER0 1413 aa16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 RTN3O95197 1032 aaPredicted RBP16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 ECEL1O95672 775 aa16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 C6orf89Q6UWU4 347 aa16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 NEK8Q86SG6 692 aa16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 TEKT4Q8WW24 435 aa16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 MS4A14Q96JA4 679 aa16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 PURBQ96QR8 312 aaKnown RBP16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 SUDS3Q9H7L9 328 aaPredicted RBP16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 ZFATQ9P243 1243 aa16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 LRWD1Q9UFC0 647 aa16.71■□□□□ 0.26
PPFIA3-206ENST00000602655 TLDC2A0PJX2 215 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 XRCC4Q13426 336 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 SIAH1Q8IUQ4 282 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 ZNF570Q96NI8 536 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 MLXIPQ9HAP2 919 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 RGL1Q9NZL6 768 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 RNF181Q9P0P0 153 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 ALAS1P13196 640 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 HERVK_113P62684 666 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 KANK3Q6NY19 840 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 NSMFQ6X4W1 530 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 KIF2BQ8N4N8 673 aa16.7■□□□□ 0.26
PPFIA3-206ENST00000602655 PRELPP51888 382 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 CALCRLQ16602 461 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 TMEM179Q6ZVK1 233 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 MOB2Q70IA6 237 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 TRPM4Q8TD43 1214 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 KRT12Q99456 494 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 RBM12Q9NTZ6 932 aaKnown RBP16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 CORO1CQ9ULV4 474 aaPredicted RBP16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 VIL1P09327 827 aaKnown RBP16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 ATP4AP20648 1035 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 DRAXINQ8NBI3 349 aaPredicted RBP16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 MDM1Q8TC05 714 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 EPAS1Q99814 870 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 SUGT1Q9Y2Z0 365 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 ZNF541Q9H0D2 1346 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 RCCD1A6NED2 376 aa16.69■□□□□ 0.26
PPFIA3-206ENST00000602655 KCNJ18B7U540 433 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms