RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 MOXD1Q6UVY6 613 aa25.62■■□□□ 1.69
SSBP4-209ENST00000601357 RTN4RL1Q86UN2 441 aaPredicted RBP25.62■■□□□ 1.69
SSBP4-209ENST00000601357 CKAP2LQ8IYA6 745 aa25.62■■□□□ 1.69
SSBP4-209ENST00000601357 FBXO22Q8NEZ5 403 aa25.62■■□□□ 1.69
SSBP4-209ENST00000601357 FTHL17Q9BXU8 183 aa25.62■■□□□ 1.69
SSBP4-209ENST00000601357 PADI3Q9ULW8 664 aa25.62■■□□□ 1.69
SSBP4-209ENST00000601357 EVPLQ92817 2033 aa25.62■■□□□ 1.69
SSBP4-209ENST00000601357 GAS7O60861 476 aa25.61■■□□□ 1.69
SSBP4-209ENST00000601357 PSMD10O75832 226 aa25.61■■□□□ 1.69
SSBP4-209ENST00000601357 CTDNEP1O95476 244 aa25.61■■□□□ 1.69
SSBP4-209ENST00000601357 TDP2O95551 362 aa25.61■■□□□ 1.69
SSBP4-209ENST00000601357 ANKRD1Q15327 319 aa25.61■■□□□ 1.69
SSBP4-209ENST00000601357 EPC2Q52LR7 807 aa25.61■■□□□ 1.69
SSBP4-209ENST00000601357 DISC1Q9NRI5 854 aa25.61■■□□□ 1.69
SSBP4-209ENST00000601357 KCNJ14Q9UNX9 436 aa25.61■■□□□ 1.69
SSBP4-209ENST00000601357 SAMM50Q9Y512 469 aa25.61■■□□□ 1.69
SSBP4-209ENST00000601357 ZNF862O60290 1169 aa25.6■■□□□ 1.69
SSBP4-209ENST00000601357 LINC00271P0C7V0 271 aa25.6■■□□□ 1.69
SSBP4-209ENST00000601357 PAK2Q13177 524 aa25.6■■□□□ 1.69
SSBP4-209ENST00000601357 LRCH2Q5VUJ6 765 aa25.6■■□□□ 1.69
SSBP4-209ENST00000601357 B3GNT9Q6UX72 402 aa25.6■■□□□ 1.69
SSBP4-209ENST00000601357 GJA10Q969M2 543 aa25.6■■□□□ 1.69
SSBP4-209ENST00000601357 ZNF689Q96CS4 500 aaPredicted RBP25.6■■□□□ 1.69
SSBP4-209ENST00000601357 FAM167AQ96KS9 214 aa25.6■■□□□ 1.69
SSBP4-209ENST00000601357 TEKT3Q9BXF9 490 aa25.6■■□□□ 1.69
SSBP4-209ENST00000601357 UNC45AQ9H3U1 944 aa25.6■■□□□ 1.69
SSBP4-209ENST00000601357 SFNP31947 248 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 TFF2Q03403 129 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 NONOQ15233 471 aaKnown RBP eCLIP25.59■■□□□ 1.691e-6■■■■□ 20.3
SSBP4-209ENST00000601357 SKIV2LQ15477 1246 aaKnown RBP25.59■■□□□ 1.69
SSBP4-209ENST00000601357 KRT25Q7Z3Z0 450 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 TMEM192Q8IY95 271 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 ETNPPLQ8TBG4 499 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 TMEM40Q8WWA1 233 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 TMX1Q9H3N1 280 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 CDHR5Q9HBB8 845 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 COG5Q9UP83 839 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 CEP131Q9UPN4 1083 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 ADGRA3Q8IWK6 1321 aa25.59■■□□□ 1.69
SSBP4-209ENST00000601357 H3BNC9 293 aa25.58■■□□□ 1.69
SSBP4-209ENST00000601357 DGKIO75912 1065 aa25.58■■□□□ 1.69
SSBP4-209ENST00000601357 JAK3P52333 1124 aa25.58■■□□□ 1.69
SSBP4-209ENST00000601357 UGCGQ16739 394 aa25.58■■□□□ 1.69
SSBP4-209ENST00000601357 FAM43BQ6ZT52 329 aaPredicted RBP25.58■■□□□ 1.69
SSBP4-209ENST00000601357 LINC01465Q8N7H1 131 aa25.58■■□□□ 1.69
SSBP4-209ENST00000601357 RDM1Q8NG50 284 aa25.58■■□□□ 1.69
SSBP4-209ENST00000601357 DTNBO60941 627 aa25.57■■□□□ 1.68
SSBP4-209ENST00000601357 OATP04181 439 aa25.57■■□□□ 1.68
SSBP4-209ENST00000601357 INF2Q27J81 1249 aa25.57■■□□□ 1.68
SSBP4-209ENST00000601357 TMEM266Q2M3C6 531 aa25.57■■□□□ 1.68
SSBP4-209ENST00000601357 TRMT1LQ7Z2T5 733 aaKnown RBP25.57■■□□□ 1.68
SSBP4-209ENST00000601357 FIBCD1Q8N539 461 aa25.57■■□□□ 1.68
SSBP4-209ENST00000601357 ERVK-5Q9HDB9 667 aa25.57■■□□□ 1.68
SSBP4-209ENST00000601357 GJB4Q9NTQ9 266 aa25.57■■□□□ 1.68
SSBP4-209ENST00000601357 TTC28Q96AY4 2481 aa25.57■■□□□ 1.68
SSBP4-209ENST00000601357 C5orf67F2Z3F1 127 aa25.56■■□□□ 1.68
SSBP4-209ENST00000601357 CHMP2AO43633 222 aa25.56■■□□□ 1.68
SSBP4-209ENST00000601357 EIF5BO60841 1220 aaKnown RBP25.56■■□□□ 1.68
SSBP4-209ENST00000601357 LARGE1O95461 756 aa25.56■■□□□ 1.68
SSBP4-209ENST00000601357 SEC24BO95487 1268 aa25.56■■□□□ 1.68
SSBP4-209ENST00000601357 CENPBP07199 599 aaPredicted RBP25.56■■□□□ 1.68
SSBP4-209ENST00000601357 BMP1P13497 986 aa25.56■■□□□ 1.68
SSBP4-209ENST00000601357 PRKCEQ02156 737 aa25.56■■□□□ 1.68
SSBP4-209ENST00000601357 ME3Q16798 604 aa25.56■■□□□ 1.68
SSBP4-209ENST00000601357 AAK1Q2M2I8 961 aa25.56■■□□□ 1.68
SSBP4-209ENST00000601357 CLP1Q92989 425 aaKnown RBP25.56■■□□□ 1.68
SSBP4-209ENST00000601357 MRPL38Q96DV4 380 aaKnown RBP25.56■■□□□ 1.68
SSBP4-209ENST00000601357 NOC2LQ9Y3T9 749 aaKnown RBP25.56■■□□□ 1.68
SSBP4-209ENST00000601357 MAGEB2O15479 319 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 SLC37A4O43826 429 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 GPR32O75388 356 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 FDPSP14324 419 aaKnown RBP25.55■■□□□ 1.68
SSBP4-209ENST00000601357 XBP1P17861 261 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 CRYBB1P53674 252 aaPredicted RBP25.55■■□□□ 1.68
SSBP4-209ENST00000601357 NPAS4Q8IUM7 802 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 ADAMTS19Q8TE59 1207 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 HLA-CQ95604 372 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 GTF3C6Q969F1 213 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 NRBP2Q9NSY0 501 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 DDX25Q9UHL0 483 aaKnown RBP25.55■■□□□ 1.68
SSBP4-209ENST00000601357 GINS2Q9Y248 185 aa25.55■■□□□ 1.68
SSBP4-209ENST00000601357 RPS6KA5O75582 802 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 VTNP04004 478 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 KCNQ1P51787 676 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 GPM6BQ13491 265 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 KIZQ2M2Z5 673 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 PPP4R3AQ6IN85 833 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 METTL13Q8N6R0 699 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 NECAB1Q8N987 351 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 OXER1Q8TDS5 423 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 ORC3Q9UBD5 711 aaPredicted RBP25.54■■□□□ 1.68
SSBP4-209ENST00000601357 ATG2AQ2TAZ0 1938 aa25.54■■□□□ 1.68
SSBP4-209ENST00000601357 KIAA1671Q9BY89 1806 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 CCDC194A0A1B0GVG4 234 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 MGEA5O60502 916 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 STBD1O95210 358 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 CLCN3P51790 818 aa25.53■■□□□ 1.68
SSBP4-209ENST00000601357 NFX1Q12986 1120 aaKnown RBP25.53■■□□□ 1.68
SSBP4-209ENST00000601357 TARBP2Q15633 366 aaKnown RBP25.53■■□□□ 1.68
SSBP4-209ENST00000601357 PTPROQ16827 1216 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms