RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 THSD7BQ9C0I4 1608 aa5.99□□□□□ -1.45
VRK3-222ENST00000601324 EDC4Q6P2E9 1401 aaKnown RBP5.99□□□□□ -1.45
VRK3-222ENST00000601324 ZNF831Q5JPB2 1677 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 ADAMTS7Q9UKP4 1686 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 PDE4DIPQ5VU43 2346 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 RAB3GAP2Q9H2M9 1393 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.98□□□□□ -1.45
VRK3-222ENST00000601324 RASSF10A6NK89 507 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 PPP1R11O60927 126 aaPredicted RBP5.98□□□□□ -1.45
VRK3-222ENST00000601324 MSL3P1P0C860 447 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 PNLIPP16233 465 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 CANXP27824 592 aaKnown RBP5.98□□□□□ -1.45
VRK3-222ENST00000601324 TM4SF1P30408 202 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 CHRNA5P30532 468 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 BCL6P41182 706 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 CYP4F8P98187 520 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 KIZQ2M2Z5 673 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 MTDHQ86UE4 582 aaKnown RBP5.98□□□□□ -1.45
VRK3-222ENST00000601324 NLRP10Q86W26 655 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 NINJ1Q92982 152 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 LTV1Q96GA3 475 aaPredicted RBP5.98□□□□□ -1.45
VRK3-222ENST00000601324 ALG1Q9BT22 464 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 MTA3Q9BTC8 594 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 SLKQ9H2G2 1235 aaPredicted RBP5.98□□□□□ -1.45
VRK3-222ENST00000601324 MARCH2Q9P0N8 246 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 FBXL7Q9UJT9 491 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 YBX2Q9Y2T7 364 aaKnown RBP5.98□□□□□ -1.45
VRK3-222ENST00000601324 RWDD3Q9Y3V2 267 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 PCDH11XQ9BZA7 1347 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 PCDH11YQ9BZA8 1340 aa5.98□□□□□ -1.45
VRK3-222ENST00000601324 RTL1A6NKG5 1358 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 H7BY64 318 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 POLRMTO00411 1230 aaKnown RBP5.97□□□□□ -1.45
VRK3-222ENST00000601324 CRTAMO95727 393 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 APPP05067 770 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 ITGB5P18084 799 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 ARL4AP40617 200 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 GUCY1A3Q02108 690 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 TEX2Q8IWB9 1127 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 PLEKHO2Q8TD55 490 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 TMEM169Q96HH4 297 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 SCLYQ96I15 445 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 CHAMP1Q96JM3 812 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 MAGEB10Q96LZ2 347 aaPredicted RBP5.97□□□□□ -1.45
VRK3-222ENST00000601324 SLC12A5Q9H2X9 1139 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 CLDND1Q9NY35 253 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 PCDHA9Q9Y5H5 950 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 ADAMTSL1Q8N6G6 1762 aa5.97□□□□□ -1.45
VRK3-222ENST00000601324 MYH14Q7Z406 1995 aaKnown RBP5.97□□□□□ -1.45
VRK3-222ENST00000601324 A0A1W2PP64 1363 aa5.96□□□□□ -1.45
VRK3-222ENST00000601324 A0A1W2PQJ5 194 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 C22orf46C9J442 243 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 ARVCFO00192 962 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 RPS6KA4O75676 772 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 RASGRP1O95267 797 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 PAPLNO95428 1278 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 FUCA1P04066 466 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 JUNBP17275 347 aaPredicted RBP5.96□□□□□ -1.46
VRK3-222ENST00000601324 FPR2P25090 351 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 GRK2P25098 689 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 TACR1P25103 407 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 GRK3P35626 688 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 GALK1P51570 392 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 IRAK1P51617 712 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 GYS2P54840 703 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 C21orf62-AS1Q17RA5 79 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 CEP68Q76N32 757 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 FGD2Q7Z6J4 655 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 CABP7Q86V35 215 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 ZSWIM9Q86XI8 627 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 RIOX2Q8IUF8 465 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 SIRT2Q8IXJ6 389 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 NIM1KQ8IY84 436 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 FAM177A1Q8N128 213 aaPredicted RBP5.96□□□□□ -1.46
VRK3-222ENST00000601324 USP33Q8TEY7 942 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 TRMT2BQ96GJ1 504 aaKnown RBP5.96□□□□□ -1.46
VRK3-222ENST00000601324 CDIP1Q9H305 208 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 TNFRSF12AQ9NP84 129 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 INTS7Q9NVH2 962 aaKnown RBP5.96□□□□□ -1.46
VRK3-222ENST00000601324 FBLN5Q9UBX5 448 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 PCDHA8Q9Y5H6 950 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 X6R8D5 127 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 COL5A3P25940 1745 aaPredicted RBP5.96□□□□□ -1.46
VRK3-222ENST00000601324 TIAM2Q8IVF5 1701 aa5.96□□□□□ -1.46
VRK3-222ENST00000601324 SRGAP3O43295 1099 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 DNAJC8O75937 253 aaPredicted RBP5.95□□□□□ -1.46
VRK3-222ENST00000601324 SOD2P04179 222 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 GLI1P08151 1106 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 GLI4P10075 376 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 ERVFRD-1P60508 538 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 PAK1Q13153 545 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 LTBP1Q14766 1721 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 KCNMB1Q16558 191 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 BICRALQ6AI39 1079 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 MFSD3Q96ES6 412 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 INTS4Q96HW7 963 aaKnown RBP5.95□□□□□ -1.46
VRK3-222ENST00000601324 SLC6A17Q9H1V8 727 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 NRXN2Q9P2S2 1712 aa5.95□□□□□ -1.46
VRK3-222ENST00000601324 MAGEC2Q9UBF1 373 aaPredicted RBP5.95□□□□□ -1.46
VRK3-222ENST00000601324 PPARGC1AQ9UBK2 798 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms