RNA–Protein interactions for RNA: ENST00000600962.5

SOX2-OT-235, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 472 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-235ENST00000600962 CXXC1Q9P0U4 656 aaPredicted RBP15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 CEP131Q9UPN4 1083 aa15.23■□□□□ 0.03
SOX2-OT-235ENST00000600962 DDX11L8A8MPP1 907 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 STX6O43752 255 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 FXR1P51114 621 aaKnown RBP eCLIP15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 FXR2P51116 673 aaKnown RBP eCLIP15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 CLCN3P51790 818 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 MRPS6P82932 125 aaKnown RBP15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 TMEM62Q0P6H9 643 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 IL17AQ16552 155 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 MTERF2Q49AM1 385 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 C4orf19Q8IY42 314 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 KIAA0319LQ8IZA0 1049 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 LINC01465Q8N7H1 131 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 SPRYD3Q8NCJ5 442 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 FTOQ9C0B1 505 aaKnown RBP eCLIP15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 ZSWIM4Q9H7M6 989 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 CDY2AQ9Y6F7 541 aa15.22■□□□□ 0.03
SOX2-OT-235ENST00000600962 LAD1O00515 517 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 ZBTB39O15060 712 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 DKC1O60832 514 aaKnown RBP eCLIP15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 RPLP2P05387 115 aaKnown RBP15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 HSP90AA1P07900 732 aaKnown RBP15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 SPATA31C1P0DKV0 1188 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 PRPHP41219 470 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 NPEPPSP55786 919 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 ATP2C1P98194 919 aaPredicted RBP15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 TBC1D8BQ0IIM8 1120 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 FAM109BQ6ICB4 259 aaPredicted RBP15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 TPH2Q8IWU9 490 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 LRRC71Q8N4P6 559 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 METTL13Q8N6R0 699 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 ZNF579Q8NAF0 562 aaKnown RBP15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 NEK9Q8TD19 979 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 LRCH3Q96II8 777 aa15.21■□□□□ 0.03
SOX2-OT-235ENST00000600962 MAGEB2O15479 319 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 MED24O75448 989 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 LYPLA2O95372 231 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 GHRP10912 638 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 YWHABP31946 246 aaKnown RBP15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 LPIN1Q14693 890 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 TMEM266Q2M3C6 531 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 PLEKHG4Q58EX7 1191 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 EFCAB12Q6NXP0 572 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 FAM173BQ6P4H8 233 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 CNKSR3Q6P9H4 555 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 IGSF22Q8N9C0 903 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 CYP26B1Q9NR63 512 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 TRPV2Q9Y5S1 764 aa15.2■□□□□ 0.02
SOX2-OT-235ENST00000600962 IGKV6-21A0A0C4DH24 114 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 ZBBXA8MT70 800 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 VTNP04004 478 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 ACTN1P12814 892 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 DRP2Q13474 957 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 FBXO47Q5MNV8 452 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 IER5Q5VY09 327 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 CATSPER3Q86XQ3 398 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 NME8Q8N427 588 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 DBF4BQ8NFT6 615 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 CEP170P1Q96L14 293 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 PPP1R16BQ96T49 567 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 POLR3CQ9BUI4 534 aaPredicted RBP15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 CELF4Q9BZC1 486 aaKnown RBP15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 MTIF3Q9H2K0 278 aaKnown RBP15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 SUGCTQ9HAC7 445 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 CDHR5Q9HBB8 845 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 LRWD1Q9UFC0 647 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 SCN5AQ14524 2016 aa15.19■□□□□ 0.02
SOX2-OT-235ENST00000600962 KDM3AQ9Y4C1 1321 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 LAMA3Q16787 3333 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 A0A087WWV3 80 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 PP2D1A8MPX8 630 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 M0QZ92 97 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 GPR32O75388 356 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 MAFO75444 373 aaPredicted RBP15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 BAIAP3O94812 1187 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 RPA1P27694 616 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 PDIA5Q14554 519 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 SF3A1Q15459 793 aaKnown RBP15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 KIZQ2M2Z5 673 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 DTHD1Q6ZMT9 781 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 ERMNQ8TAM6 284 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 PIGOQ8TEQ8 1089 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 IFIH1Q9BYX4 1025 aaKnown RBP15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 DHX33Q9H6R0 707 aaKnown RBP15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 AGO3Q9H9G7 860 aaKnown RBP15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 TUFT1Q9NNX1 390 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 AKT3Q9Y243 479 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 SLC4A7Q9Y6M7 1214 aa15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 TRIP12Q14669 1992 aaPredicted RBP15.18■□□□□ 0.02
SOX2-OT-235ENST00000600962 GRXCR1A8MXD5 290 aa15.17■□□□□ 0.02
SOX2-OT-235ENST00000600962 TMOD1P28289 359 aa15.17■□□□□ 0.02
SOX2-OT-235ENST00000600962 WDR5P61964 334 aaKnown RBP15.17■□□□□ 0.02
SOX2-OT-235ENST00000600962 SMAD3P84022 425 aaKnown RBP15.17■□□□□ 0.02
SOX2-OT-235ENST00000600962 PKP1Q13835 747 aa15.17■□□□□ 0.02
SOX2-OT-235ENST00000600962 ECM1Q16610 540 aa15.17■□□□□ 0.02
SOX2-OT-235ENST00000600962 XKR9Q5GH70 373 aa15.17■□□□□ 0.02
SOX2-OT-235ENST00000600962 TSHZ1Q6ZSZ6 1077 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms