RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 RC3H2Q9HBD1 1191 aaKnown RBP17.88■□□□□ 0.45
VRK3-221ENST00000600284 SAMM50Q9Y512 469 aa17.88■□□□□ 0.45
VRK3-221ENST00000600284 C5orf67F2Z3F1 127 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 MAGEB2O15479 319 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 SFNP31947 248 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 JAK3P52333 1124 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 TFF2Q03403 129 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 TMEM62Q0P6H9 643 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 ANKRD1Q15327 319 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 RTN4RL1Q86UN2 441 aaPredicted RBP17.87■□□□□ 0.45
VRK3-221ENST00000600284 CRIPAKQ8N1N5 446 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 ZNF710Q8N1W2 664 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 SLC5A5Q92911 643 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 CLP1Q92989 425 aaKnown RBP17.87■□□□□ 0.45
VRK3-221ENST00000600284 MRPL38Q96DV4 380 aaKnown RBP17.87■□□□□ 0.45
VRK3-221ENST00000600284 SLKQ9H2G2 1235 aaPredicted RBP17.87■□□□□ 0.45
VRK3-221ENST00000600284 DISC1Q9NRI5 854 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 NRBP2Q9NSY0 501 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 GABBR1Q9UBS5 961 aa17.87■□□□□ 0.45
VRK3-221ENST00000600284 COL4A4P53420 1690 aaPredicted RBP17.87■□□□□ 0.45
VRK3-221ENST00000600284 GAS7O60861 476 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 DGKIO75912 1065 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 C22orf31O95567 290 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 STAG3L1P0CL83 205 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 BMPR1AP36894 532 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 SCRN1Q12765 414 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 GPM6BQ13491 265 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 NPY5RQ15761 445 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 NPAS4Q8IUM7 802 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 RDM1Q8NG50 284 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 UHRF1Q96T88 793 aaPredicted RBP17.86■□□□□ 0.45
VRK3-221ENST00000600284 TEKT3Q9BXF9 490 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
VRK3-221ENST00000600284 ADGRA3Q8IWK6 1321 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 TTC3P53804 2025 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 TTC28Q96AY4 2481 aa17.86■□□□□ 0.45
VRK3-221ENST00000600284 PFKFB2O60825 505 aa17.85■□□□□ 0.45
VRK3-221ENST00000600284 RPS6KA5O75582 802 aa17.85■□□□□ 0.45
VRK3-221ENST00000600284 XBP1P17861 261 aa17.85■□□□□ 0.45
VRK3-221ENST00000600284 CRYBB1P53674 252 aaPredicted RBP17.85■□□□□ 0.45
VRK3-221ENST00000600284 NONOQ15233 471 aaKnown RBP eCLIP17.85■□□□□ 0.45
VRK3-221ENST00000600284 LRCH2Q5VUJ6 765 aa17.85■□□□□ 0.45
VRK3-221ENST00000600284 KRT25Q7Z3Z0 450 aa17.85■□□□□ 0.45
VRK3-221ENST00000600284 LINC01599Q8WXQ3 324 aa17.85■□□□□ 0.45
VRK3-221ENST00000600284 MBOAT7Q96N66 472 aa17.85■□□□□ 0.45
VRK3-221ENST00000600284 STK36Q9NRP7 1315 aa17.85■□□□□ 0.45
VRK3-221ENST00000600284 REV3LO60673 3130 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.84■□□□□ 0.45
VRK3-221ENST00000600284 GPR182O15218 404 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 PSMD10O75832 226 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 LINC00271P0C7V0 271 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 TMOD1P28289 359 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 BTG3Q14201 252 aaPredicted RBP17.84■□□□□ 0.45
VRK3-221ENST00000600284 TIGD5Q53EQ6 642 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 CMTR2Q8IYT2 770 aaKnown RBP17.84■□□□□ 0.45
VRK3-221ENST00000600284 METTL13Q8N6R0 699 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 AIFM3Q96NN9 605 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 C11orf84Q9BUA3 381 aaPredicted RBP17.84■□□□□ 0.45
VRK3-221ENST00000600284 PHF20Q9BVI0 1012 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 PLVAPQ9BX97 442 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 LMAN2LQ9H0V9 348 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 TMX1Q9H3N1 280 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 ERVK-5Q9HDB9 667 aa17.84■□□□□ 0.45
VRK3-221ENST00000600284 NOC2LQ9Y3T9 749 aaKnown RBP17.84■□□□□ 0.45
VRK3-221ENST00000600284 ZNF862O60290 1169 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 OATP04181 439 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 CTNNB1P35222 781 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 KCNQ1P51787 676 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 NFX1Q12986 1120 aaKnown RBP17.83■□□□□ 0.44
VRK3-221ENST00000600284 B3GNT9Q6UX72 402 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 UNC45AQ9H3U1 944 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 CDHR5Q9HBB8 845 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 RGS18Q9NS28 235 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 C1orf112Q9NSG2 853 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 TPCN1Q9ULQ1 816 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 GINS2Q9Y248 185 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 XIRP2A4UGR9 3374 aa17.83■□□□□ 0.44
VRK3-221ENST00000600284 MYH9P35579 1960 aaKnown RBP17.82■□□□□ 0.44
VRK3-221ENST00000600284 GPR32O75388 356 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 TDP2O95551 362 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 SARSP49591 514 aaKnown RBP17.82■□□□□ 0.44
VRK3-221ENST00000600284 TMEM266Q2M3C6 531 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 NAALADL2Q58DX5 795 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 EFCAB12Q6NXP0 572 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 TRMT1LQ7Z2T5 733 aaKnown RBP17.82■□□□□ 0.44
VRK3-221ENST00000600284 MIER3Q7Z3K6 550 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 LINC01465Q8N7H1 131 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 BANK1Q8NDB2 785 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 ETNPPLQ8TBG4 499 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 TMEM40Q8WWA1 233 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 WASF1Q92558 559 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 MAP7D2Q96T17 732 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 UBE2ZQ9H832 354 aaPredicted RBP17.82■□□□□ 0.44
VRK3-221ENST00000600284 LRFN2Q9ULH4 789 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 ST3GAL5Q9UNP4 418 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 KCNJ14Q9UNX9 436 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 RALGAPA2Q2PPJ7 1873 aa17.82■□□□□ 0.44
VRK3-221ENST00000600284 CCDC194A0A1B0GVG4 234 aa17.81■□□□□ 0.44
VRK3-221ENST00000600284 CHMP2AO43633 222 aa17.81■□□□□ 0.44
VRK3-221ENST00000600284 AK2P54819 239 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms