RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 HOXA13P31271 388 aaPredicted RBP15.82■□□□□ 0.12
HOMER3-212ENST00000600077 NT5C2P49902 561 aa15.82■□□□□ 0.12
HOMER3-212ENST00000600077 IRX6P78412 446 aaPredicted RBP15.82■□□□□ 0.12
HOMER3-212ENST00000600077 COL9A2Q14055 689 aaPredicted RBP15.82■□□□□ 0.12
HOMER3-212ENST00000600077 ODR4Q5SWX8 454 aa15.82■□□□□ 0.12
HOMER3-212ENST00000600077 RARS2Q5T160 578 aaKnown RBP15.82■□□□□ 0.12
HOMER3-212ENST00000600077 MRPL43Q8N983 215 aaKnown RBP15.82■□□□□ 0.12
HOMER3-212ENST00000600077 SUMF1Q8NBK3 374 aa15.82■□□□□ 0.12
HOMER3-212ENST00000600077 PNMA1Q8ND90 353 aa15.82■□□□□ 0.12
HOMER3-212ENST00000600077 TNPO1Q92973 898 aaKnown RBP15.82■□□□□ 0.12
HOMER3-212ENST00000600077 SECISBP2LQ93073 1101 aaKnown RBP15.82■□□□□ 0.12
HOMER3-212ENST00000600077 ZFP91Q96JP5 570 aaPredicted RBP15.82■□□□□ 0.12
HOMER3-212ENST00000600077 CWH43Q9H720 699 aa15.82■□□□□ 0.12
HOMER3-212ENST00000600077 IGSF9Q9P2J2 1179 aa15.82■□□□□ 0.12
HOMER3-212ENST00000600077 NCDNQ9UBB6 729 aa15.82■□□□□ 0.12
HOMER3-212ENST00000600077 LAMA4Q16363 1823 aa15.82■□□□□ 0.12
HOMER3-212ENST00000600077 CHD6Q8TD26 2715 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 A0A0D9SFI3 127 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 WEE2P0C1S8 567 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 IBSPP21815 317 aaPredicted RBP15.81■□□□□ 0.12
HOMER3-212ENST00000600077 LMNB2Q03252 620 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 NONOQ15233 471 aaKnown RBP eCLIP15.81■□□□□ 0.12
HOMER3-212ENST00000600077 MCMDC2Q4G0Z9 681 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 FNDC1Q4ZHG4 1894 aaPredicted RBP15.81■□□□□ 0.12
HOMER3-212ENST00000600077 VARS2Q5ST30 1063 aaKnown RBP15.81■□□□□ 0.12
HOMER3-212ENST00000600077 MARCH8Q5T0T0 291 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 MFSD6Q6ZSS7 791 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 SLC24A5Q71RS6 500 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 C1orf210Q8IVY1 113 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 PLEKHM2Q8IWE5 1019 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 FAM227BQ96M60 508 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 CELF4Q9BZC1 486 aaKnown RBP15.81■□□□□ 0.12
HOMER3-212ENST00000600077 FAM49AQ9H0Q0 323 aaPredicted RBP15.81■□□□□ 0.12
HOMER3-212ENST00000600077 OSBPL3Q9H4L5 887 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 KAT14Q9H8E8 782 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 KCNK12Q9HB15 430 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 KDM3AQ9Y4C1 1321 aa15.81■□□□□ 0.12
HOMER3-212ENST00000600077 SPTBN2O15020 2390 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 DENND3A2RUS2 1198 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 C2orf71A6NGG8 1288 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 CLASP2O75122 1294 aaKnown RBP15.8■□□□□ 0.12
HOMER3-212ENST00000600077 FGAP02671 866 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 CENPBP07199 599 aaPredicted RBP15.8■□□□□ 0.12
HOMER3-212ENST00000600077 PARP1P09874 1014 aaKnown RBP15.8■□□□□ 0.12
HOMER3-212ENST00000600077 ARP10275 920 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 PDE4AP27815 886 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 TCF7P36402 384 aaPredicted RBP15.8■□□□□ 0.12
HOMER3-212ENST00000600077 MFAP1P55081 439 aaKnown RBP15.8■□□□□ 0.12
HOMER3-212ENST00000600077 SP4Q02446 784 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 NFX1Q12986 1120 aaKnown RBP15.8■□□□□ 0.12
HOMER3-212ENST00000600077 NMIQ13287 307 aaPredicted RBP15.8■□□□□ 0.12
HOMER3-212ENST00000600077 FAM102BQ5T8I3 360 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 VPS53Q5VIR6 699 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 KCNT2Q6UVM3 1135 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 CCDC149Q6ZUS6 474 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 FCHSD1Q86WN1 690 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 NME8Q8N427 588 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 TMEM87AQ8NBN3 555 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 ESR2Q92731 530 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 ZNF558Q96NG5 402 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 RNF41Q9H4P4 317 aaPredicted RBP15.8■□□□□ 0.12
HOMER3-212ENST00000600077 ATP6V0A4Q9HBG4 840 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 RGS18Q9NS28 235 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 DIAPH3Q9NSV4 1193 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 ATRXP46100 2492 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 CFAP47Q6ZTR5 3102 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 FANCMQ8IYD8 2048 aa15.8■□□□□ 0.12
HOMER3-212ENST00000600077 MRPS9P82933 396 aaKnown RBP15.79■□□□□ 0.12
HOMER3-212ENST00000600077 IQCA1Q86XH1 822 aa15.79■□□□□ 0.12
HOMER3-212ENST00000600077 SEPT1Q8WYJ6 367 aa15.79■□□□□ 0.12
HOMER3-212ENST00000600077 GLG1Q92896 1179 aa15.79■□□□□ 0.12
HOMER3-212ENST00000600077 SMARCAD1Q9H4L7 1026 aa15.79■□□□□ 0.12
HOMER3-212ENST00000600077 ELAC1Q9H777 363 aaKnown RBP15.79■□□□□ 0.12
HOMER3-212ENST00000600077 TMEM161AQ9NX61 479 aa15.79■□□□□ 0.12
HOMER3-212ENST00000600077 SPG21Q9NZD8 308 aa15.79■□□□□ 0.12
HOMER3-212ENST00000600077 ZMYM6O95789 1325 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 HIP1O00291 1037 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 ZBTB5O15062 677 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 SPTLC1O15269 473 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 HOXA2O43364 376 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 MARK3P27448 753 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 IGBP1P78318 339 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 KRT76Q01546 638 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 SEMA3FQ13275 785 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 GIT2Q14161 759 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 PHLDB3Q6NSJ2 640 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 C12orf76Q8N812 135 aaPredicted RBP15.78■□□□□ 0.12
HOMER3-212ENST00000600077 ADAM2Q99965 735 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 TMEM117Q9H0C3 514 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 RTEL1Q9NZ71 1219 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 HCSTQ9UBK5 93 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 SIT1Q9Y3P8 196 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 PCDHA2Q9Y5H9 948 aa15.78■□□□□ 0.12
HOMER3-212ENST00000600077 DCDC2BA2VCK2 349 aa15.77■□□□□ 0.12
HOMER3-212ENST00000600077 C9IYK1 514 aa15.77■□□□□ 0.12
HOMER3-212ENST00000600077 CFHP08603 1231 aa15.77■□□□□ 0.12
HOMER3-212ENST00000600077 SDSP20132 328 aa15.77■□□□□ 0.12
HOMER3-212ENST00000600077 TMEM62Q0P6H9 643 aa15.77■□□□□ 0.12
HOMER3-212ENST00000600077 ACAP1Q15027 740 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms