RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 UNC45AQ9H3U1 944 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 INSL6Q9Y581 213 aa15.92■□□□□ 0.14
LIG1-218ENST00000599322 TCF20Q9UGU0 1960 aaKnown RBP15.92■□□□□ 0.14
LIG1-218ENST00000599322 GTPBP6O43824 516 aaPredicted RBP15.91■□□□□ 0.14
LIG1-218ENST00000599322 GJB5O95377 273 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 CHRNA1P02708 482 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 OATP04181 439 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 CA3P07451 260 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 IGFBP4P22692 258 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 MCM2P49736 904 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 FAM117BQ6P1L5 589 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 TSHZ1Q6ZSZ6 1077 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 OXER1Q8TDS5 423 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 CELF4Q9BZC1 486 aaKnown RBP15.91■□□□□ 0.14
LIG1-218ENST00000599322 GJB4Q9NTQ9 266 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 GINS2Q9Y248 185 aa15.91■□□□□ 0.14
LIG1-218ENST00000599322 TTC28Q96AY4 2481 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 TRANK1O15050 2925 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 MYOGP15173 224 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 DNM2P50570 870 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 DEFB103AP81534 67 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 PRKCEQ02156 737 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 TBC1D8BQ0IIM8 1120 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 TMEM62Q0P6H9 643 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 PAK2Q13177 524 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 NR5A1Q13285 461 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 XKR3Q5GH77 459 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 FBXO47Q5MNV8 452 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 EXOC8Q8IYI6 725 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 ETNPPLQ8TBG4 499 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 PPM1EQ8WY54 764 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 SYMPKQ92797 1274 aaKnown RBP15.9■□□□□ 0.14
LIG1-218ENST00000599322 YME1L1Q96TA2 773 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 JPH2Q9BR39 696 aaPredicted RBP15.9■□□□□ 0.14
LIG1-218ENST00000599322 IGSF9BQ9UPX0 1349 aa15.9■□□□□ 0.14
LIG1-218ENST00000599322 DDX11L8A8MPP1 907 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 BTBD18B2RXH4 712 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 DTNBO60941 627 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 UPP2O95045 317 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 PSMC5P62195 406 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 CDC42EP1Q00587 391 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 MGAT3Q09327 533 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 LPIN1Q14693 890 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 TJAP1Q5JTD0 557 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.89■□□□□ 0.13
LIG1-218ENST00000599322 SCLT1Q96NL6 688 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 TSPYL2Q9H2G4 693 aaPredicted RBP15.89■□□□□ 0.13
LIG1-218ENST00000599322 SUGCTQ9HAC7 445 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 SEPT9Q9UHD8 586 aaPredicted RBP15.89■□□□□ 0.13
LIG1-218ENST00000599322 NOL7Q9UMY1 257 aaKnown RBP15.89■□□□□ 0.13
LIG1-218ENST00000599322 AKT3Q9Y243 479 aa15.89■□□□□ 0.13
LIG1-218ENST00000599322 GPR182O15218 404 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 SLC37A4O43826 429 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 EDIL3O43854 480 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 RPS6KA5O75582 802 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 P4HBP07237 508 aaKnown RBP15.88■□□□□ 0.13
LIG1-218ENST00000599322 ATP4AP20648 1035 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 QARSP47897 775 aaKnown RBP15.88■□□□□ 0.13
LIG1-218ENST00000599322 GUCY1B3Q02153 619 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 NFX1Q12986 1120 aaKnown RBP15.88■□□□□ 0.13
LIG1-218ENST00000599322 PPP2R5CQ13362 524 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 CALCRLQ16602 461 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 EFCAB12Q6NXP0 572 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 OTUD6AQ7L8S5 288 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 ARNTL2Q8WYA1 636 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 GJA10Q969M2 543 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 KCNMB3Q9NPA1 279 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 PCDHA12Q9UN75 941 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 COL4A4P53420 1690 aaPredicted RBP15.88■□□□□ 0.13
LIG1-218ENST00000599322 KDM3AQ9Y4C1 1321 aa15.88■□□□□ 0.13
LIG1-218ENST00000599322 NEMFO60524 1076 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 C22orf31O95567 290 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 STAG3L1P0CL83 205 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 ATP2B1P20020 1258 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 CD52P31358 61 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 CRYBB1P53674 252 aaPredicted RBP15.87■□□□□ 0.13
LIG1-218ENST00000599322 EPHA7Q15375 998 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 CCDC85BQ15834 202 aaPredicted RBP15.87■□□□□ 0.13
LIG1-218ENST00000599322 MTERF2Q49AM1 385 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 NCAPH2Q6IBW4 605 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 KIAA0319LQ8IZA0 1049 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 TOP1MTQ969P6 601 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 ZBTB10Q96DT7 871 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 CCDC43Q96MW1 224 aaKnown RBP15.87■□□□□ 0.13
LIG1-218ENST00000599322 SAMD11Q96NU1 681 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 TGS1Q96RS0 853 aaKnown RBP15.87■□□□□ 0.13
LIG1-218ENST00000599322 KIF2CQ99661 725 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 FOXP1Q9H334 677 aaPredicted RBP15.87■□□□□ 0.13
LIG1-218ENST00000599322 LRFN2Q9ULH4 789 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 PADI3Q9ULW8 664 aa15.87■□□□□ 0.13
LIG1-218ENST00000599322 PRRC2BQ5JSZ5 2229 aaKnown RBP15.86■□□□□ 0.13
LIG1-218ENST00000599322 TAP1Q03518 808 aa15.86■□□□□ 0.13
LIG1-218ENST00000599322 TMCO2Q7Z6W1 182 aaPredicted RBP15.86■□□□□ 0.13
LIG1-218ENST00000599322 POTEDQ86YR6 584 aa15.86■□□□□ 0.13
LIG1-218ENST00000599322 BANK1Q8NDB2 785 aa15.86■□□□□ 0.13
LIG1-218ENST00000599322 FBXO18Q8NFZ0 1043 aa15.86■□□□□ 0.13
LIG1-218ENST00000599322 NIFKQ9BYG3 293 aaKnown RBP15.86■□□□□ 0.13
LIG1-218ENST00000599322 CERS4Q9HA82 394 aa15.86■□□□□ 0.13
LIG1-218ENST00000599322 PPME1Q9Y570 386 aa15.86■□□□□ 0.13
LIG1-218ENST00000599322 MYH9P35579 1960 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms