RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 YEATS4O95619 227 aa22.74■■□□□ 1.23
PNKP-211ENST00000598020 LONP1P36776 959 aaKnown RBP22.74■■□□□ 1.23
PNKP-211ENST00000598020 PRPF38BQ5VTL8 546 aaKnown RBP22.74■■□□□ 1.23
PNKP-211ENST00000598020 KRT79Q5XKE5 535 aa22.74■■□□□ 1.23
PNKP-211ENST00000598020 RUFY4Q6ZNE9 571 aa22.74■■□□□ 1.23
PNKP-211ENST00000598020 TMEM199Q8N511 208 aa22.74■■□□□ 1.23
PNKP-211ENST00000598020 LINC00301Q8NCQ3 95 aa22.74■■□□□ 1.23
PNKP-211ENST00000598020 GDF15Q99988 308 aa22.74■■□□□ 1.23
PNKP-211ENST00000598020 WNT8AQ9H1J5 351 aa22.74■■□□□ 1.23
PNKP-211ENST00000598020 CYP26B1Q9NR63 512 aa22.74■■□□□ 1.23
PNKP-211ENST00000598020 ANKEF1Q9NU02 776 aa22.74■■□□□ 1.23
PNKP-211ENST00000598020 SRPRBQ9Y5M8 271 aaKnown RBP22.74■■□□□ 1.23
PNKP-211ENST00000598020 SLC26A4O43511 780 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 PARNO95453 639 aaKnown RBP22.73■■□□□ 1.23
PNKP-211ENST00000598020 IQCF3P0C7M6 154 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 SELPP16109 830 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 MAGEA10P43363 369 aaPredicted RBP22.73■■□□□ 1.23
PNKP-211ENST00000598020 CEBPZQ03701 1054 aaKnown RBP22.73■■□□□ 1.23
PNKP-211ENST00000598020 FAM26DQ5JW98 314 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 TRAF7Q6Q0C0 670 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 RSPH3Q86UC2 560 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 NME8Q8N427 588 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 KCTD17Q8N5Z5 321 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 LINC01465Q8N7H1 131 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 NACC1Q96RE7 527 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 MMTAG2Q9BU76 263 aaKnown RBP22.73■■□□□ 1.23
PNKP-211ENST00000598020 TFIP11Q9UBB9 837 aaKnown RBP22.73■■□□□ 1.23
PNKP-211ENST00000598020 DAXXQ9UER7 740 aaPredicted RBP22.73■■□□□ 1.23
PNKP-211ENST00000598020 FBXO2Q9UK22 296 aaPredicted RBP22.73■■□□□ 1.23
PNKP-211ENST00000598020 ATP6V1DQ9Y5K8 247 aa22.73■■□□□ 1.23
PNKP-211ENST00000598020 IGKV6-21A0A0C4DH24 114 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 TMEM150BA6NC51 233 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 RFC2P35250 354 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 THPOP40225 353 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 CCT6AP40227 531 aaKnown RBP22.72■■□□□ 1.23
PNKP-211ENST00000598020 MTERF2Q49AM1 385 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 HYIQ5T013 277 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 ZNF618Q5T7W0 954 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 LRRC8DQ7L1W4 858 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 EXOC8Q8IYI6 725 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 SNX29Q8TEQ0 813 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 ZBTB10Q96DT7 871 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 DBR1Q9UK59 544 aaKnown RBP22.72■■□□□ 1.23
PNKP-211ENST00000598020 CFAP45Q9UL16 551 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 TANC1Q9C0D5 1861 aa22.72■■□□□ 1.23
PNKP-211ENST00000598020 PP2D1A8MPX8 630 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 ZBTB39O15060 712 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 PPP6R2O75170 966 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 MAFO75444 373 aaPredicted RBP22.71■■□□□ 1.23
PNKP-211ENST00000598020 BMP8BP34820 402 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 NPEPPSP55786 919 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 MDM2Q00987 491 aaPredicted RBP22.71■■□□□ 1.23
PNKP-211ENST00000598020 GRIN1Q05586 938 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 FPGSQ05932 587 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 TBC1D8BQ0IIM8 1120 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 STK38Q15208 465 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 PLA2G4FQ68DD2 849 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 KIAA0319LQ8IZA0 1049 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 DNAJB3Q8WWF6 145 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 CEP170P1Q96L14 293 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 JPH2Q9BR39 696 aaPredicted RBP22.71■■□□□ 1.23
PNKP-211ENST00000598020 TSHZ2Q9NRE2 1034 aa22.71■■□□□ 1.23
PNKP-211ENST00000598020 SPTLC2O15270 562 aa22.7■■□□□ 1.22
PNKP-211ENST00000598020 MARCKSP29966 332 aaPredicted RBP22.7■■□□□ 1.22
PNKP-211ENST00000598020 CDC25AP30304 524 aa22.7■■□□□ 1.22
PNKP-211ENST00000598020 RFC5P40937 340 aa22.7■■□□□ 1.22
PNKP-211ENST00000598020 CCL23P55773 120 aa22.7■■□□□ 1.22
PNKP-211ENST00000598020 DNM1Q05193 864 aaKnown RBP22.7■■□□□ 1.22
PNKP-211ENST00000598020 PPIGQ13427 754 aaKnown RBP eCLIP22.7■■□□□ 1.222e-7■■■□□ 18.9
PNKP-211ENST00000598020 ECM1Q16610 540 aa22.7■■□□□ 1.22
PNKP-211ENST00000598020 ZNF710Q8N1W2 664 aa22.7■■□□□ 1.22
PNKP-211ENST00000598020 KRI1Q8N9T8 703 aaKnown RBP22.7■■□□□ 1.22
PNKP-211ENST00000598020 PRO3102Q9H379 93 aa22.7■■□□□ 1.22
PNKP-211ENST00000598020 DHX33Q9H6R0 707 aaKnown RBP22.7■■□□□ 1.22
PNKP-211ENST00000598020 CIZ1Q9ULV3 898 aaPredicted RBP22.7■■□□□ 1.22
PNKP-211ENST00000598020 RBM19Q9Y4C8 960 aaKnown RBP22.7■■□□□ 1.22
PNKP-211ENST00000598020 ARID2Q68CP9 1835 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 KDM3AQ9Y4C1 1321 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 RSPH10B2B2RC85 870 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 RSPH10BP0C881 870 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 CSF2RAP15509 400 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 TMOD1P28289 359 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 RARRES1P49788 294 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 XKR9Q5GH70 373 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 EFCAB12Q6NXP0 572 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 POTEGQ6S5H5 508 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 ZNF579Q8NAF0 562 aaKnown RBP22.69■■□□□ 1.22
PNKP-211ENST00000598020 PIGOQ8TEQ8 1089 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 SCLYQ96I15 445 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 SH2D3AQ9BRG2 576 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 PCDH10Q9P2E7 1040 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 RCOR1Q9UKL0 485 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 KIAA1024Q9UPX6 916 aa22.69■■□□□ 1.22
PNKP-211ENST00000598020 PFKMP08237 780 aa22.68■■□□□ 1.22
PNKP-211ENST00000598020 UBA7P41226 1012 aa22.68■■□□□ 1.22
PNKP-211ENST00000598020 MRPS6P82932 125 aaKnown RBP22.68■■□□□ 1.22
PNKP-211ENST00000598020 MGAT3Q09327 533 aa22.68■■□□□ 1.22
PNKP-211ENST00000598020 GPNMBQ14956 572 aa22.68■■□□□ 1.22
PNKP-211ENST00000598020 IER5Q5VY09 327 aa22.68■■□□□ 1.22
PNKP-211ENST00000598020 RPUSD2Q8IZ73 545 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms