RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 CEP89Q96ST8 783 aa20.31■□□□□ 0.84
IRF3-216ENST00000597180 SEPT9Q9UHD8 586 aaPredicted RBP20.31■□□□□ 0.84
IRF3-216ENST00000597180 PTPRSQ13332 1948 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 MAGEB2O15479 319 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 SLITRK3O94933 977 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 FGBP02675 491 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 CTSHP09668 335 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 TECP42680 631 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 ATP2C1P98194 919 aaPredicted RBP20.3■□□□□ 0.84
IRF3-216ENST00000597180 MGAT3Q09327 533 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 TMEM266Q2M3C6 531 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 LRIT3Q3SXY7 679 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 ANO5Q75V66 913 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 NME8Q8N427 588 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 HERVK_113Q902F9 699 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 RNPC3Q96LT9 517 aaKnown RBP20.3■□□□□ 0.84
IRF3-216ENST00000597180 FAM49AQ9H0Q0 323 aaPredicted RBP20.3■□□□□ 0.84
IRF3-216ENST00000597180 ZSWIM4Q9H7M6 989 aa20.3■□□□□ 0.84
IRF3-216ENST00000597180 GBF1Q92538 1859 aa20.29■□□□□ 0.84
IRF3-216ENST00000597180 TMEM150BA6NC51 233 aa20.29■□□□□ 0.84
IRF3-216ENST00000597180 LYPLA2O95372 231 aa20.29■□□□□ 0.84
IRF3-216ENST00000597180 CHRNA1P02708 482 aa20.29■□□□□ 0.84
IRF3-216ENST00000597180 PDIA4P13667 645 aaKnown RBP20.29■□□□□ 0.84
IRF3-216ENST00000597180 MRPS6P82932 125 aaKnown RBP20.29■□□□□ 0.84
IRF3-216ENST00000597180 CYP4A11Q02928 519 aa20.29■□□□□ 0.84
IRF3-216ENST00000597180 CTTNQ14247 550 aaKnown RBP20.29■□□□□ 0.84
IRF3-216ENST00000597180 KIAA0319LQ8IZA0 1049 aa20.29■□□□□ 0.84
IRF3-216ENST00000597180 LINC01465Q8N7H1 131 aa20.29■□□□□ 0.84
IRF3-216ENST00000597180 DDX11L8A8MPP1 907 aa20.28■□□□□ 0.84
IRF3-216ENST00000597180 PDIA5Q14554 519 aa20.28■□□□□ 0.84
IRF3-216ENST00000597180 MTERF2Q49AM1 385 aa20.28■□□□□ 0.84
IRF3-216ENST00000597180 TPH2Q8IWU9 490 aa20.28■□□□□ 0.84
IRF3-216ENST00000597180 IGSF22Q8N9C0 903 aa20.28■□□□□ 0.84
IRF3-216ENST00000597180 TUFT1Q9NNX1 390 aa20.28■□□□□ 0.84
IRF3-216ENST00000597180 PPME1Q9Y570 386 aa20.28■□□□□ 0.84
IRF3-216ENST00000597180 SPATA31C1P0DKV0 1188 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 ACTN1P12814 892 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 YWHABP31946 246 aaKnown RBP20.27■□□□□ 0.84
IRF3-216ENST00000597180 TBC1D8BQ0IIM8 1120 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 IL17AQ16552 155 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 IER5Q5VY09 327 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 CNKSR3Q6P9H4 555 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 OTOP2Q7RTS6 562 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 ERMNQ8TAM6 284 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 POLR3CQ9BUI4 534 aaPredicted RBP20.27■□□□□ 0.84
IRF3-216ENST00000597180 FTOQ9C0B1 505 aaKnown RBP eCLIP20.27■□□□□ 0.84
IRF3-216ENST00000597180 MTIF3Q9H2K0 278 aaKnown RBP20.27■□□□□ 0.84
IRF3-216ENST00000597180 ZSCAN16Q9H4T2 348 aaPredicted RBP20.27■□□□□ 0.84
IRF3-216ENST00000597180 CYP26B1Q9NR63 512 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 CDY2AQ9Y6F7 541 aa20.27■□□□□ 0.84
IRF3-216ENST00000597180 KDM3AQ9Y4C1 1321 aa20.27■□□□□ 0.83
IRF3-216ENST00000597180 IGKV6-21A0A0C4DH24 114 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 BMP15O95972 392 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 PLEKHG4Q58EX7 1191 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 ARL6IP4Q66PJ3 421 aaKnown RBP20.26■□□□□ 0.83
IRF3-216ENST00000597180 PLA2G4FQ68DD2 849 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 EFCAB12Q6NXP0 572 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 DTHD1Q6ZMT9 781 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 OTUD6AQ7L8S5 288 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 CATSPER3Q86XQ3 398 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 METTL13Q8N6R0 699 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 OSBPL7Q9BZF2 842 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 RAB34Q9BZG1 259 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 TRPV2Q9Y5S1 764 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 SQORQ9Y6N5 450 aa20.26■□□□□ 0.83
IRF3-216ENST00000597180 M0QZ92 97 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 MAFO75444 373 aaPredicted RBP20.25■□□□□ 0.83
IRF3-216ENST00000597180 MED24O75448 989 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 BAIAP3O94812 1187 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 MUTP22033 750 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 RPA1P27694 616 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 TMOD1P28289 359 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 NPEPPSP55786 919 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 SH2D3AQ9BRG2 576 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 CELF4Q9BZC1 486 aaKnown RBP20.25■□□□□ 0.83
IRF3-216ENST00000597180 ANKEF1Q9NU02 776 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 CXXC1Q9P0U4 656 aaPredicted RBP20.25■□□□□ 0.83
IRF3-216ENST00000597180 LRWD1Q9UFC0 647 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 STK24Q9Y6E0 443 aa20.25■□□□□ 0.83
IRF3-216ENST00000597180 ZBTB39O15060 712 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 XRCC6P12956 609 aaKnown RBP eCLIP20.24■□□□□ 0.83
IRF3-216ENST00000597180 CLCN3P51790 818 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 TMEM62Q0P6H9 643 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 LPIN1Q14693 890 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 SF3A1Q15459 793 aaKnown RBP20.24■□□□□ 0.83
IRF3-216ENST00000597180 TCTN1Q2MV58 587 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 FBXO47Q5MNV8 452 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 HAUS3Q68CZ6 603 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 ZNF710Q8N1W2 664 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 LRRC71Q8N4P6 559 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 ZNF579Q8NAF0 562 aaKnown RBP20.24■□□□□ 0.83
IRF3-216ENST00000597180 SPRYD3Q8NCJ5 442 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 CEP170P1Q96L14 293 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 MAP7D2Q96T17 732 aa20.24■□□□□ 0.83
IRF3-216ENST00000597180 JPH2Q9BR39 696 aaPredicted RBP20.24■□□□□ 0.83
IRF3-216ENST00000597180 DHX33Q9H6R0 707 aaKnown RBP20.24■□□□□ 0.83
IRF3-216ENST00000597180 SOX1O00570 391 aaPredicted RBP20.23■□□□□ 0.83
IRF3-216ENST00000597180 RFC5P40937 340 aa20.23■□□□□ 0.83
IRF3-216ENST00000597180 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
IRF3-216ENST00000597180 MKRN4PQ13434 485 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms