RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 NEMFO60524 1076 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 U2AF2P26368 475 aaKnown RBP eCLIP23.71■■□□□ 1.39
PNKP-209ENST00000596726 KCNJ6P48051 423 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 DEFB103AP81534 67 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 LPIN1Q14693 890 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 EPHA7Q15375 998 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 TARBP2Q15633 366 aaKnown RBP23.71■■□□□ 1.39
PNKP-209ENST00000596726 CALCRLQ16602 461 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 FBXO47Q5MNV8 452 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 NOSTRINQ8IVI9 506 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 HERC6Q8IVU3 1022 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 APBB2Q92870 758 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 FAM161BQ96MY7 647 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 GUCD1Q96NT3 240 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 NIFKQ9BYG3 293 aaKnown RBP23.71■■□□□ 1.39
PNKP-209ENST00000596726 TRPV2Q9Y5S1 764 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 SQORQ9Y6N5 450 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 MAGEB2O15479 319 aa23.7■■□□□ 1.38
PNKP-209ENST00000596726 GHRP10912 638 aa23.7■■□□□ 1.38
PNKP-209ENST00000596726 GJB2P29033 226 aa23.7■■□□□ 1.38
PNKP-209ENST00000596726 PSMC5P62195 406 aa23.7■■□□□ 1.38
PNKP-209ENST00000596726 XKR3Q5GH77 459 aa23.7■■□□□ 1.38
PNKP-209ENST00000596726 LINC01465Q8N7H1 131 aa23.7■■□□□ 1.38
PNKP-209ENST00000596726 BANK1Q8NDB2 785 aa23.7■■□□□ 1.38
PNKP-209ENST00000596726 CEP89Q96ST8 783 aa23.7■■□□□ 1.38
PNKP-209ENST00000596726 IFIH1Q9BYX4 1025 aaKnown RBP23.7■■□□□ 1.38
PNKP-209ENST00000596726 CELF4Q9BZC1 486 aaKnown RBP23.7■■□□□ 1.38
PNKP-209ENST00000596726 ZNF576Q9H609 170 aa23.7■■□□□ 1.38
PNKP-209ENST00000596726 P4HBP07237 508 aaKnown RBP23.69■■□□□ 1.38
PNKP-209ENST00000596726 QARSP47897 775 aaKnown RBP23.69■■□□□ 1.38
PNKP-209ENST00000596726 TMEM62Q0P6H9 643 aa23.69■■□□□ 1.38
PNKP-209ENST00000596726 ORC2Q13416 577 aaPredicted RBP23.69■■□□□ 1.38
PNKP-209ENST00000596726 CUL4AQ13619 759 aa23.69■■□□□ 1.38
PNKP-209ENST00000596726 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.69■■□□□ 1.38
PNKP-209ENST00000596726 TMEM60Q9H2L4 133 aa23.69■■□□□ 1.38
PNKP-209ENST00000596726 NKX2-4Q9H2Z4 354 aa23.69■■□□□ 1.38
PNKP-209ENST00000596726 PCDHA12Q9UN75 941 aa23.69■■□□□ 1.38
PNKP-209ENST00000596726 MYO9BQ13459 2157 aa23.69■■□□□ 1.38
PNKP-209ENST00000596726 CHD7Q9P2D1 2997 aa23.68■■□□□ 1.38
PNKP-209ENST00000596726 M0QZ92 97 aa23.68■■□□□ 1.38
PNKP-209ENST00000596726 MYOGP15173 224 aa23.68■■□□□ 1.38
PNKP-209ENST00000596726 ATP2B1P20020 1258 aa23.68■■□□□ 1.38
PNKP-209ENST00000596726 TRAPPC10P48553 1259 aa23.68■■□□□ 1.38
PNKP-209ENST00000596726 NCAPH2Q6IBW4 605 aa23.68■■□□□ 1.38
PNKP-209ENST00000596726 TSHZ1Q6ZSZ6 1077 aa23.68■■□□□ 1.38
PNKP-209ENST00000596726 USP38Q8NB14 1042 aa23.68■■□□□ 1.38
PNKP-209ENST00000596726 TTC12Q9H892 705 aaPredicted RBP23.68■■□□□ 1.38
PNKP-209ENST00000596726 AGO3Q9H9G7 860 aaKnown RBP23.68■■□□□ 1.38
PNKP-209ENST00000596726 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.68■■□□□ 1.38
PNKP-209ENST00000596726 DKC1O60832 514 aaKnown RBP eCLIP23.67■■□□□ 1.38
PNKP-209ENST00000596726 MCM7P33993 719 aa23.67■■□□□ 1.38
PNKP-209ENST00000596726 GNL2Q13823 731 aaKnown RBP23.67■■□□□ 1.38
PNKP-209ENST00000596726 EFCAB12Q6NXP0 572 aa23.67■■□□□ 1.38
PNKP-209ENST00000596726 ANO5Q75V66 913 aa23.67■■□□□ 1.38
PNKP-209ENST00000596726 METTL13Q8N6R0 699 aa23.67■■□□□ 1.38
PNKP-209ENST00000596726 WRAP73Q9P2S5 460 aaPredicted RBP23.67■■□□□ 1.38
PNKP-209ENST00000596726 SEPT9Q9UHD8 586 aaPredicted RBP23.67■■□□□ 1.38
PNKP-209ENST00000596726 SMC3Q9UQE7 1217 aa23.67■■□□□ 1.38
PNKP-209ENST00000596726 CDH23Q9H251 3354 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.66■■□□□ 1.38
PNKP-209ENST00000596726 TMEM150BA6NC51 233 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 GJB5O95377 273 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 TXKP42681 527 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 ZNF174Q15697 407 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 TTC38Q5R3I4 469 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 TMCO2Q7Z6W1 182 aaPredicted RBP23.66■■□□□ 1.38
PNKP-209ENST00000596726 C4orf19Q8IY42 314 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 CDX2Q99626 313 aaPredicted RBP23.66■■□□□ 1.38
PNKP-209ENST00000596726 CDHR5Q9HBB8 845 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 RGL1Q9NZL6 768 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 STXBP5LQ9Y2K9 1186 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 COL6A3P12111 3177 aa23.66■■□□□ 1.38
PNKP-209ENST00000596726 IGKV6-21A0A0C4DH24 114 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 DDX11L8A8MPP1 907 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 GPR32O75388 356 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 TOB1P50616 345 aaPredicted RBP23.65■■□□□ 1.38
PNKP-209ENST00000596726 CLCN3P51790 818 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 GRIN2CQ14957 1233 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 MTERF2Q49AM1 385 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 LRRC71Q8N4P6 559 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 DYDC2Q96IM9 177 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 LXNQ9BS40 222 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 SLC28A3Q9HAS3 691 aa23.65■■□□□ 1.38
PNKP-209ENST00000596726 NOL7Q9UMY1 257 aaKnown RBP23.65■■□□□ 1.38
PNKP-209ENST00000596726 TTC3P53804 2025 aa23.64■■□□□ 1.38
PNKP-209ENST00000596726 TLL1O43897 1013 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 SLITRK3O94933 977 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 AMHP03971 560 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 TMOD1P28289 359 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 CD52P31358 61 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 TBC1D8BQ0IIM8 1120 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 C4orf32Q8N8J7 132 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 TOP1MTQ969P6 601 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 HSD17B14Q9BPX1 270 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 EIF2AK1Q9BQI3 630 aaKnown RBP23.64■■□□□ 1.37
PNKP-209ENST00000596726 PADI3Q9ULW8 664 aa23.64■■□□□ 1.37
PNKP-209ENST00000596726 ARID2Q68CP9 1835 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 VTNP04004 478 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 CA3P07451 260 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 CRYBB1P53674 252 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms