RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 WNK4Q96J92 1243 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 CDK5RAP3Q96JB5 506 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 MS4A4AQ96JQ5 239 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 ATP6V1G3Q96LB4 118 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 PLIN2Q99541 437 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 TACO1Q9BSH4 297 aaKnown RBP9.41□□□□□ -0.9
SIN3B-208ENST00000596638 MRIQ9BWK5 157 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 CFHR5Q9BXR6 569 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 ISCUQ9H1K1 167 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 SLC39A2Q9NP94 309 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 FAM207AQ9NSI2 230 aaPredicted RBP9.41□□□□□ -0.9
SIN3B-208ENST00000596638 SEC63Q9UGP8 760 aaKnown RBP9.41□□□□□ -0.9
SIN3B-208ENST00000596638 SERPINA10Q9UK55 444 aa9.41□□□□□ -0.9
SIN3B-208ENST00000596638 PLIN4Q96Q06 1357 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 ZNF233A6NK53 670 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 NDUFAB1O14561 156 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 PPP1R12BO60237 982 aaPredicted RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 TLR2O60603 784 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 PPP1R37O75864 691 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 GFPT2O94808 682 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 NOL4O94818 638 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 KIAA0754O94854 1291 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 HEXIM1O94992 359 aaKnown RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 LDHBP07195 334 aaKnown RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 GLI1P08151 1106 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 PLCG2P16885 1265 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 HNRNPH1P31943 449 aaKnown RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 MDH1P40925 334 aaKnown RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 SLC1A4P43007 532 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 NAP1L1P55209 391 aaKnown RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 EVX2Q03828 476 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 BIRC3Q13489 604 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 CALCRLQ16602 461 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 PTGISQ16647 500 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 EDRF1Q3B7T1 1238 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 SUPT20HL1Q3ZLR7 823 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 FAM83BQ5T0W9 1011 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 AGBL2Q5U5Z8 902 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 TRIM59Q8IWR1 403 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 USP38Q8NB14 1042 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 ACTRT1Q8TDG2 376 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 TBCKQ8TEA7 893 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 SCFD2Q8WU76 684 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 CASKIN2Q8WXE0 1202 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 LRRC45Q96CN5 670 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 CCDC43Q96MW1 224 aaKnown RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 GDAP1L1Q96MZ0 367 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 TMBIM4Q9HC24 238 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 BMP2KQ9NSY1 1161 aaPredicted RBP9.4□□□□□ -0.9
SIN3B-208ENST00000596638 SALL4Q9UJQ4 1053 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 INTUQ9ULD6 942 aa9.4□□□□□ -0.9
SIN3B-208ENST00000596638 DDX60LQ5H9U9 1706 aaKnown RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 KDM3AQ9Y4C1 1321 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 A0A0A6YYK5 440 aaPredicted RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 CCDC188H7C350 402 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 NCK2O43639 380 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 PALMO75781 387 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 SLURP2P0DP57 97 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 GCFC2P16383 781 aaKnown RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 NR1D1P20393 614 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 PRDX5P30044 214 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 LSP1P33241 339 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 CARSP49589 748 aaKnown RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 NPEPPSP55786 919 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 GSCP56915 257 aaPredicted RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 SLC7A5Q01650 507 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 GFPT1Q06210 699 aaPredicted RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 MTMR3Q13615 1198 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 ASPRV1Q53RT3 343 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 C6orf89Q6UWU4 347 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 RUFY4Q6ZNE9 571 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 CCDC91Q7Z6B0 441 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 ZFPM1Q8IX07 1006 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 OTUD6BQ8N6M0 293 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 SH3RF3Q8TEJ3 882 aaPredicted RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 LMBR1Q8WVP7 490 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 TAF4BQ92750 862 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 P3H4Q92791 437 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 DNAJC19Q96DA6 116 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 DYNLL2Q96FJ2 89 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 FAM163AQ96GL9 167 aaPredicted RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 RNPC3Q96LT9 517 aaKnown RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 NCAPGQ9BPX3 1015 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 NT5C3AQ9H0P0 336 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 GLT8D2Q9H1C3 349 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 ACTR5Q9H9F9 607 aaPredicted RBP9.39□□□□□ -0.91
SIN3B-208ENST00000596638 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 EPB41L5Q9HCM4 733 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 SWAP70Q9UH65 585 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 FBXL5Q9UKA1 691 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 NENFQ9UMX5 172 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 PPP2R3BQ9Y5P8 575 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
SIN3B-208ENST00000596638 GPR75-ASB3A0A0A6YYF3 556 aa9.38□□□□□ -0.91
SIN3B-208ENST00000596638 FRMD3A2A2Y4 597 aa9.38□□□□□ -0.91
SIN3B-208ENST00000596638 MANSC4A6NHS7 340 aaPredicted RBP9.38□□□□□ -0.91
SIN3B-208ENST00000596638 NKRFO15226 690 aaKnown RBP eCLIP9.38□□□□□ -0.91
SIN3B-208ENST00000596638 EDIL3O43854 480 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms