RNA–Protein interactions for RNA: ENST00000596518.1

SYMPK-206, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-206ENST00000596518 LRWD1Q9UFC0 647 aa11.87□□□□□ -0.51
SYMPK-206ENST00000596518 COLQQ9Y215 455 aaPredicted RBP11.87□□□□□ -0.51
SYMPK-206ENST00000596518 CLIC4Q9Y696 253 aa11.87□□□□□ -0.51
SYMPK-206ENST00000596518 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 PP2D1A8MPX8 630 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 DKC1O60832 514 aaKnown RBP eCLIP11.86□□□□□ -0.51
SYMPK-206ENST00000596518 MED24O75448 989 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 C22orf31O95567 290 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 IQCF3P0C7M6 154 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 PRPHP41219 470 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 FXR2P51116 673 aaKnown RBP eCLIP11.86□□□□□ -0.51
SYMPK-206ENST00000596518 NPEPPSP55786 919 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 TMEM62Q0P6H9 643 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 PPIGQ13427 754 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■□□□□ 10.6
SYMPK-206ENST00000596518 TAF2Q6P1X5 1199 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 ANO5Q75V66 913 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 METTL13Q8N6R0 699 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 HSD17B14Q9BPX1 270 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 NIFKQ9BYG3 293 aaKnown RBP11.86□□□□□ -0.51
SYMPK-206ENST00000596518 ZSWIM4Q9H7M6 989 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
SYMPK-206ENST00000596518 CEP131Q9UPN4 1083 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 PCDHA2Q9Y5H9 948 aa11.86□□□□□ -0.51
SYMPK-206ENST00000596518 GBF1Q92538 1859 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 RSPH10B2B2RC85 870 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 F13A1P00488 732 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 RSPH10BP0C881 870 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 SPATA31C1P0DKV0 1188 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 CDC25AP30304 524 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 YWHABP31946 246 aaKnown RBP11.85□□□□□ -0.51
SYMPK-206ENST00000596518 CCT6AP40227 531 aaKnown RBP11.85□□□□□ -0.51
SYMPK-206ENST00000596518 CLCN3P51790 818 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 RBL2Q08999 1139 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 TBC1D8BQ0IIM8 1120 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 C9orf50Q5SZB4 431 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 TRAF7Q6Q0C0 670 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 C16orf59Q7L2K0 433 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 RSPH3Q86UC2 560 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 CATSPER3Q86XQ3 398 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 C4orf19Q8IY42 314 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 LRRC71Q8N4P6 559 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 IGSF22Q8N9C0 903 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
SYMPK-206ENST00000596518 ERMNQ8TAM6 284 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 NEK9Q8TD19 979 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 PIGOQ8TEQ8 1089 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 USP28Q96RU2 1077 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 PPP1R16BQ96T49 567 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 OSBPL7Q9BZF2 842 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 RAB34Q9BZG1 259 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 PRO3102Q9H379 93 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 IL23AQ9NPF7 189 aa11.85□□□□□ -0.51
SYMPK-206ENST00000596518 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
SYMPK-206ENST00000596518 PTPRSQ13332 1948 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 SMIM35A0A1B0GVV1 85 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 NBNO60934 754 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 BMP15O95972 392 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 CHRNA1P02708 482 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 PRR29P0C7W0 189 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 PDIA4P13667 645 aaKnown RBP11.84□□□□□ -0.51
SYMPK-206ENST00000596518 MARCKSP29966 332 aaPredicted RBP11.84□□□□□ -0.51
SYMPK-206ENST00000596518 BMP8BP34820 402 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 MRPS6P82932 125 aaKnown RBP11.84□□□□□ -0.51
SYMPK-206ENST00000596518 PDIA5Q14554 519 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 MBTPS1Q14703 1052 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 GPNMBQ14956 572 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 PTPAQ15257 358 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 SHHQ15465 462 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 TARBP2Q15633 366 aaKnown RBP11.84□□□□□ -0.51
SYMPK-206ENST00000596518 XKR9Q5GH70 373 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 ARL6IP4Q66PJ3 421 aaKnown RBP11.84□□□□□ -0.51
SYMPK-206ENST00000596518 EFCAB12Q6NXP0 572 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 POTEGQ6S5H5 508 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 ZNF365Q70YC5 407 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 SNX29Q8TEQ0 813 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 CEP170P1Q96L14 293 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 CEP89Q96ST8 783 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.84□□□□□ -0.517e-12■□□□□ 8.9
SYMPK-206ENST00000596518 POLR3CQ9BUI4 534 aaPredicted RBP11.84□□□□□ -0.51
SYMPK-206ENST00000596518 SUGCTQ9HAC7 445 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 TUFT1Q9NNX1 390 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 CYP26B1Q9NR63 512 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 TFIP11Q9UBB9 837 aaKnown RBP11.84□□□□□ -0.51
SYMPK-206ENST00000596518 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 MICAL3Q7RTP6 2002 aa11.84□□□□□ -0.51
SYMPK-206ENST00000596518 MAGEB2O15479 319 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 CAND2O75155 1236 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 LYPLA2O95372 231 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 BRD1O95696 1058 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 VTNP04004 478 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 RPA1P27694 616 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 RFC2P35250 354 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 GRIN1Q05586 938 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 ZRSR1Q15695 479 aaKnown RBP11.83□□□□□ -0.52
SYMPK-206ENST00000596518 ECM1Q16610 540 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 TMEM240Q5SV17 173 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 KRT79Q5XKE5 535 aa11.83□□□□□ -0.52
SYMPK-206ENST00000596518 HAUS3Q68CZ6 603 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms