RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CATSPER3Q86XQ3 398 aa16.07■□□□□ 0.16
LIG1-208ENST00000595758 DNAJB3Q8WWF6 145 aa16.07■□□□□ 0.16
LIG1-208ENST00000595758 SCLYQ96I15 445 aa16.07■□□□□ 0.16
LIG1-208ENST00000595758 USP28Q96RU2 1077 aa16.07■□□□□ 0.16
LIG1-208ENST00000595758 UBE2OQ9C0C9 1292 aaKnown RBP16.07■□□□□ 0.16
LIG1-208ENST00000595758 DAXXQ9UER7 740 aaPredicted RBP16.07■□□□□ 0.16
LIG1-208ENST00000595758 WDR81Q562E7 1941 aa16.07■□□□□ 0.16
LIG1-208ENST00000595758 SMIM35A0A1B0GVV1 85 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 RSPH10B2B2RC85 870 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 MED24O75448 989 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 BRD1O95696 1058 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 RPLP2P05387 115 aaKnown RBP16.06■□□□□ 0.16
LIG1-208ENST00000595758 RSPH10BP0C881 870 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 RPA1P27694 616 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 RFC2P35250 354 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 CCT6AP40227 531 aaKnown RBP16.06■□□□□ 0.16
LIG1-208ENST00000595758 TBC1D8BQ0IIM8 1120 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 PTPAQ15257 358 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 KRT79Q5XKE5 535 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 PLA2G4FQ68DD2 849 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 METTL13Q8N6R0 699 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 CEP170P1Q96L14 293 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 SH2D3AQ9BRG2 576 aa16.06■□□□□ 0.16
LIG1-208ENST00000595758 TFIP11Q9UBB9 837 aaKnown RBP16.06■□□□□ 0.16
LIG1-208ENST00000595758 PP2D1A8MPX8 630 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 ZBTB39O15060 712 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 PARNO95453 639 aaKnown RBP16.05■□□□□ 0.16
LIG1-208ENST00000595758 CTSHP09668 335 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 XRCC6P12956 609 aaKnown RBP eCLIP16.05■□□□□ 0.16
LIG1-208ENST00000595758 BMP8BP34820 402 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 EPHB4P54760 987 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 NPEPPSP55786 919 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 SLC39A14Q15043 492 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
LIG1-208ENST00000595758 XKR9Q5GH70 373 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 TRAF7Q6Q0C0 670 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
LIG1-208ENST00000595758 RPUSD2Q8IZ73 545 aaKnown RBP16.05■□□□□ 0.16
LIG1-208ENST00000595758 KIAA0319LQ8IZA0 1049 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 NME8Q8N427 588 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 SNX29Q8TEQ0 813 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 SUGCTQ9HAC7 445 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 IL23AQ9NPF7 189 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 CYP26B1Q9NR63 512 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 ANKEF1Q9NU02 776 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 PPME1Q9Y570 386 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 LTBP2Q14767 1821 aa16.05■□□□□ 0.16
LIG1-208ENST00000595758 A0A087WWV3 80 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 MUTP22033 750 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 TMOD1P28289 359 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 MARCKSP29966 332 aaPredicted RBP16.04■□□□□ 0.16
LIG1-208ENST00000595758 CDC25AP30304 524 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 NASPP49321 788 aaPredicted RBP16.04■□□□□ 0.16
LIG1-208ENST00000595758 STK38Q15208 465 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 FAM26DQ5JW98 314 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 IER5Q5VY09 327 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 EFCAB12Q6NXP0 572 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 DEFB128Q7Z7B8 93 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
LIG1-208ENST00000595758 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 AK8Q96MA6 479 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 CEP89Q96ST8 783 aa16.04■□□□□ 0.16
LIG1-208ENST00000595758 JPH2Q9BR39 696 aaPredicted RBP16.04■□□□□ 0.16
LIG1-208ENST00000595758 MAFO75444 373 aaPredicted RBP16.03■□□□□ 0.16
LIG1-208ENST00000595758 CHRNA1P02708 482 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 ACRP10323 421 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 LONP1P36776 959 aaKnown RBP16.03■□□□□ 0.16
LIG1-208ENST00000595758 CLCN3P51790 818 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 MRPS6P82932 125 aaKnown RBP16.03■□□□□ 0.16
LIG1-208ENST00000595758 ATL3Q6DD88 541 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 C16orf59Q7L2K0 433 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 EXOC8Q8IYI6 725 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 LRRC71Q8N4P6 559 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 SLC7A3Q8WY07 619 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 CCDC43Q96MW1 224 aaKnown RBP16.03■□□□□ 0.16
LIG1-208ENST00000595758 MMTAG2Q9BU76 263 aaKnown RBP16.03■□□□□ 0.16
LIG1-208ENST00000595758 PRO3102Q9H379 93 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 KIAA1024Q9UPX6 916 aa16.03■□□□□ 0.16
LIG1-208ENST00000595758 COLQQ9Y215 455 aaPredicted RBP16.03■□□□□ 0.16
LIG1-208ENST00000595758 SRPRBQ9Y5M8 271 aaKnown RBP16.03■□□□□ 0.16
LIG1-208ENST00000595758 MORC2Q9Y6X9 1032 aaPredicted RBP16.03■□□□□ 0.16
LIG1-208ENST00000595758 IGKV6-21A0A0C4DH24 114 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 M0QZ92 97 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 NBNO60934 754 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 RFC5P40937 340 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 UBA7P41226 1012 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 DNM2P50570 870 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 POLGP54098 1239 aaPredicted RBP16.02■□□□□ 0.16
LIG1-208ENST00000595758 NUCB2P80303 420 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 GRIN1Q05586 938 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 TMEM62Q0P6H9 643 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 MBTPS1Q14703 1052 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 GPNMBQ14956 572 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 ZRSR1Q15695 479 aaKnown RBP16.02■□□□□ 0.16
LIG1-208ENST00000595758 ECM1Q16610 540 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 LINC01465Q8N7H1 131 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 LINC00301Q8NCQ3 95 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms