RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CSPP1Q1MSJ5 1256 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 NAALADL2Q58DX5 795 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 BMP2KLQ5H9B9 411 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 JAKMIP3Q5VZ66 844 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 NIPA1Q7RTP0 329 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 ATP8B4Q8TF62 1192 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 POF1BQ8WVV4 589 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 MSLNLQ96KJ4 702 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 CD207Q9UJ71 328 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 LRFN2Q9ULH4 789 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 PCDHGC5Q9Y5F6 944 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 WDR81Q562E7 1941 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 COL1A2P08123 1366 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 ZBTB42B2RXF5 422 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 DHX15O43143 795 aaKnown RBP18.61■□□□□ 0.57
LIG1-205ENST00000593425 ATP4AP20648 1035 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 SARSP49591 514 aaKnown RBP18.61■□□□□ 0.57
LIG1-205ENST00000593425 NDUFV1P49821 464 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 FAM160B1Q5W0V3 765 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 PLA2G4DQ86XP0 818 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 KIAA0319LQ8IZA0 1049 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 CRYGNQ8WXF5 182 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 PPP1R16BQ96T49 567 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 ZNF302Q9NR11 478 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 CLEC1BQ9P126 229 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 HCSTQ9UBK5 93 aa18.61■□□□□ 0.57
LIG1-205ENST00000593425 RPS6KA5O75582 802 aa18.6■□□□□ 0.57
LIG1-205ENST00000593425 TSGA10IPQ3SY00 556 aa18.6■□□□□ 0.57
LIG1-205ENST00000593425 PDXDC2PQ6P474 469 aa18.6■□□□□ 0.57
LIG1-205ENST00000593425 POP1Q99575 1024 aaKnown RBP18.6■□□□□ 0.57
LIG1-205ENST00000593425 GLT8D2Q9H1C3 349 aa18.6■□□□□ 0.57
LIG1-205ENST00000593425 MUTYHQ9UIF7 546 aa18.6■□□□□ 0.57
LIG1-205ENST00000593425 MYH9P35579 1960 aaKnown RBP18.6■□□□□ 0.57
LIG1-205ENST00000593425 C5orf42Q9H799 3197 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 PPFIA3O75145 1194 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 GLP2RO95838 553 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 ADD1P35611 737 aaKnown RBP18.59■□□□□ 0.57
LIG1-205ENST00000593425 NRIP1P48552 1158 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 PFKFB3Q16875 520 aaPredicted RBP18.59■□□□□ 0.57
LIG1-205ENST00000593425 ZNF484Q5JVG2 852 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 SWSAP1Q6NVH7 229 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 MIS18BP1Q6P0N0 1132 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 RBM23Q86U06 439 aaKnown RBP18.59■□□□□ 0.57
LIG1-205ENST00000593425 EFHBQ8N7U6 833 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 PPP2R3CQ969Q6 453 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 ADAM2Q99965 735 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 RGS18Q9NS28 235 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 ST3GAL5Q9UNP4 418 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 PCDHB7Q9Y5E2 793 aa18.59■□□□□ 0.57
LIG1-205ENST00000593425 C9IYK1 514 aa18.58■□□□□ 0.56
LIG1-205ENST00000593425 IPO5O00410 1097 aaKnown RBP18.58■□□□□ 0.56
LIG1-205ENST00000593425 C22orf31O95567 290 aa18.58■□□□□ 0.56
LIG1-205ENST00000593425 EYA4O95677 639 aa18.58■□□□□ 0.56
LIG1-205ENST00000593425 CYP3A4P08684 503 aa18.58■□□□□ 0.56
LIG1-205ENST00000593425 CPA1P15085 419 aa18.58■□□□□ 0.56
LIG1-205ENST00000593425 FAM102BQ5T8I3 360 aa18.58■□□□□ 0.56
LIG1-205ENST00000593425 FAM228AQ86W67 206 aa18.58■□□□□ 0.56
LIG1-205ENST00000593425 RNF135Q8IUD6 432 aa18.58■□□□□ 0.56
LIG1-205ENST00000593425 OSMRQ99650 979 aa18.58■□□□□ 0.56
LIG1-205ENST00000593425 UPF3BQ9BZI7 483 aaKnown RBP18.58■□□□□ 0.56
LIG1-205ENST00000593425 NAP1L2Q9ULW6 460 aaPredicted RBP18.58■□□□□ 0.56
LIG1-205ENST00000593425 BARX2Q9UMQ3 279 aaPredicted RBP18.58■□□□□ 0.56
LIG1-205ENST00000593425 DENND3A2RUS2 1198 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 TBKBP1A7MCY6 615 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 METAP2P50579 478 aaKnown RBP eCLIP18.57■□□□□ 0.56
LIG1-205ENST00000593425 RCAN1P53805 252 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 APOBRQ0VD83 1088 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 KIZQ2M2Z5 673 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 HERC4Q5GLZ8 1057 aaPredicted RBP18.57■□□□□ 0.56
LIG1-205ENST00000593425 SPOUT1Q5T280 376 aaKnown RBP18.57■□□□□ 0.56
LIG1-205ENST00000593425 HFE2Q6ZVN8 426 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 TRMT1LQ7Z2T5 733 aaKnown RBP18.57■□□□□ 0.56
LIG1-205ENST00000593425 SMRP1Q8NCR6 262 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 ZNF577Q9BSK1 485 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 ZMYND12Q9H0C1 365 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 C1orf112Q9NSG2 853 aa18.57■□□□□ 0.56
LIG1-205ENST00000593425 MAFBQ9Y5Q3 323 aaPredicted RBP18.57■□□□□ 0.56
LIG1-205ENST00000593425 ESYT2A0FGR8 921 aa18.56■□□□□ 0.56
LIG1-205ENST00000593425 GPR32O75388 356 aa18.56■□□□□ 0.56
LIG1-205ENST00000593425 VTNP04004 478 aa18.56■□□□□ 0.56
LIG1-205ENST00000593425 RBM10P98175 930 aaKnown RBP18.56■□□□□ 0.56
LIG1-205ENST00000593425 COASYQ13057 564 aa18.56■□□□□ 0.56
LIG1-205ENST00000593425 KRT32Q14532 448 aa18.56■□□□□ 0.56
LIG1-205ENST00000593425 PKN1Q16512 942 aa18.56■□□□□ 0.56
LIG1-205ENST00000593425 ZNF746Q6NUN9 644 aaPredicted RBP18.56■□□□□ 0.56
LIG1-205ENST00000593425 SLC24A5Q71RS6 500 aa18.56■□□□□ 0.56
LIG1-205ENST00000593425 CKAP2LQ8IYA6 745 aa18.56■□□□□ 0.56
LIG1-205ENST00000593425 BBXQ8WY36 941 aaPredicted RBP18.56■□□□□ 0.56
LIG1-205ENST00000593425 PCDHB12Q9Y5F1 795 aa18.56■□□□□ 0.56
LIG1-205ENST00000593425 PER2O15055 1255 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 GPR182O15218 404 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 FGFR1P11362 822 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 CLCN3P51790 818 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 CRYBB1P53674 252 aaPredicted RBP18.55■□□□□ 0.56
LIG1-205ENST00000593425 SETQ01105 290 aaPredicted RBP18.55■□□□□ 0.56
LIG1-205ENST00000593425 DSC3Q14574 896 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 ODR4Q5SWX8 454 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 Q6ZUG5 572 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 ALYREFQ86V81 257 aaKnown RBP18.55■□□□□ 0.56
LIG1-205ENST00000593425 REXO1Q8N1G1 1221 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms