RNA–Protein interactions for RNA: ENST00000592410.5

ERCC1-215, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-215	ENST00000592410	COL4A3BP	Q9Y5P4	624 aa		6.28	□□□□□ -1.4
ERCC1-215	ENST00000592410	ASTN2	O75129	1339 aa	Predicted RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	UBE4B	O95155	1302 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	SCN4A	P35499	1836 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	LOC285556	D6RIA3	1793 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	FRMD3	A2A2Y4	597 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	TRIM49B	A6NDI0	452 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	VWA5A	O00534	786 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	TERT	O14746	1132 aa	Known RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	CETN3	O15182	167 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	CALU	O43852	315 aa	Predicted RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	MFAP3L	O75121	409 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	FAM13A	O94988	1023 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	CCDC175	P0C221	793 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	CCNYL3	P0C7X3	344 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	SPATA31C1	P0DKV0	1188 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	FCER1A	P12319	257 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	RPL13	P26373	211 aa	Known RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	SFN	P31947	248 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	COPB2	P35606	906 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	EPS15	P42566	896 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	JAK3	P52333	1124 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	HMGCS2	P54868	508 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	RPS6	P62753	249 aa	Known RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	SH3BP2	P78314	561 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	FKBP3	Q00688	224 aa	Known RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	PPP2R3A	Q06190	1150 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.27	□□□□□ -1.41	4e-6	■■□□□ 11.7
ERCC1-215	ENST00000592410	MTMR1	Q13613	665 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ALCAM	Q13740	583 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ARID5B	Q14865	1188 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ECM1	Q16610	540 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	MAN2A1	Q16706	1144 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	EDRF1	Q3B7T1	1238 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	GNPTAB	Q3T906	1256 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ARHGEF16	Q5VV41	709 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	CEP135	Q66GS9	1140 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ANKRD40	Q6AI12	368 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	CATSPERG	Q6ZRH7	1159 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	MIER3	Q7Z3K6	550 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	KCNK18	Q7Z418	384 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	TMTC1	Q8IUR5	882 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	TC2N	Q8N9U0	490 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	EHBP1	Q8NDI1	1231 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	SLC17A8	Q8NDX2	589 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	CHST13	Q8NET6	341 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	KIF18A	Q8NI77	898 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	CLEC4D	Q8WXI8	215 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	TBC1D5	Q92609	795 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ZKSCAN4	Q969J2	545 aa	Predicted RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	GPRASP2	Q96D09	838 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ATG4C	Q96DT6	458 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	C16orf45	Q96MC5	204 aa	Predicted RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	PCMTD1	Q96MG8	357 aa	Predicted RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	CCDC43	Q96MW1	224 aa	Known RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	RMDN3	Q96TC7	470 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	MPHOSPH6	Q99547	160 aa	Known RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	DUSP9	Q99956	384 aa	Known RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	NOC4L	Q9BVI4	516 aa	Known RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	TIPIN	Q9BVW5	301 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	TEX13B	Q9BXU2	312 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ZSWIM4	Q9H7M6	989 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ACAD9	Q9H845	621 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	JADE2	Q9NQC1	790 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	INTS13	Q9NVM9	706 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ZNHIT6	Q9NWK9	470 aa	Known RBP	6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	FBXO40	Q9UH90	709 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	ODF2L	Q9ULJ1	636 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	AFG3L2	Q9Y4W6	797 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	UBIAD1	Q9Y5Z9	338 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	MYH11	P35749	1972 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	PTPRF	P10586	1907 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	RLF	Q13129	1914 aa		6.27	□□□□□ -1.41
ERCC1-215	ENST00000592410	OTOF	Q9HC10	1997 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	ARHGEF35	A5YM69	484 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	IQCA1L	A6NCM1	817 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	WDR64	B1ANS9	1081 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	TRAF5	O00463	557 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	NFIB	O00712	420 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	PDXK	O00764	312 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	EIF3D	O15371	548 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	TEX33	O43247	280 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	CHMP2A	O43633	222 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	USP2	O75604	605 aa	Predicted RBP	6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	DDN	O94850	711 aa	Predicted RBP	6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	IPO7	O95373	1038 aa	Known RBP	6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	P4HB	P07237	508 aa	Known RBP	6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	NDUFV2	P19404	249 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	TRIM21	P19474	475 aa	Known RBP	6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	HIRA	P54198	1017 aa	Predicted RBP	6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	PMS1	P54277	932 aa	Known RBP	6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	UBXN2A	P68543	259 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	KRT76	Q01546	638 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	CYP4A11	Q02928	519 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	PPAT	Q06203	517 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	RBL2	Q08999	1139 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	TBC1D8B	Q0IIM8	1120 aa		6.26	□□□□□ -1.41
ERCC1-215	ENST00000592410	GIT2	Q14161	759 aa		6.26	□□□□□ -1.41

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