RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 SQORQ9Y6N5 450 aa18.46■□□□□ 0.55
CIRBP-233ENST00000591622 KIF28PB7ZC32 967 aa18.45■□□□□ 0.54
CIRBP-233ENST00000591622 WNT7AO00755 349 aa18.45■□□□□ 0.54
CIRBP-233ENST00000591622 GRIN2CQ14957 1233 aa18.45■□□□□ 0.54
CIRBP-233ENST00000591622 XKR3Q5GH77 459 aa18.45■□□□□ 0.54
CIRBP-233ENST00000591622 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
CIRBP-233ENST00000591622 TMCO2Q7Z6W1 182 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-233ENST00000591622 BANK1Q8NDB2 785 aa18.45■□□□□ 0.54
CIRBP-233ENST00000591622 CELF4Q9BZC1 486 aaKnown RBP18.45■□□□□ 0.54
CIRBP-233ENST00000591622 KIF3AQ9Y496 699 aa18.45■□□□□ 0.54
CIRBP-233ENST00000591622 TRPV2Q9Y5S1 764 aa18.45■□□□□ 0.54
CIRBP-233ENST00000591622 MAGEB2O15479 319 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 NEMFO60524 1076 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 STBD1O95210 358 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 AMHP03971 560 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 PSMC5P62195 406 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 SPIRE1Q08AE8 756 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 CALCRLQ16602 461 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 TSHZ1Q6ZSZ6 1077 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 METTL13Q8N6R0 699 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 USP38Q8NB14 1042 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 ZBED2Q9BTP6 218 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 NIFKQ9BYG3 293 aaKnown RBP18.44■□□□□ 0.54
CIRBP-233ENST00000591622 PCDHA12Q9UN75 941 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 CHD9Q3L8U1 2897 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 KDM3AQ9Y4C1 1321 aa18.44■□□□□ 0.54
CIRBP-233ENST00000591622 TLL1O43897 1013 aa18.43■□□□□ 0.54
CIRBP-233ENST00000591622 GJB5O95377 273 aa18.43■□□□□ 0.54
CIRBP-233ENST00000591622 CA3P07451 260 aa18.43■□□□□ 0.54
CIRBP-233ENST00000591622 ATP2B1P20020 1258 aa18.43■□□□□ 0.54
CIRBP-233ENST00000591622 QARSP47897 775 aaKnown RBP18.43■□□□□ 0.54
CIRBP-233ENST00000591622 GNL2Q13823 731 aaKnown RBP18.43■□□□□ 0.54
CIRBP-233ENST00000591622 EPHA7Q15375 998 aa18.43■□□□□ 0.54
CIRBP-233ENST00000591622 TARBP2Q15633 366 aaKnown RBP18.43■□□□□ 0.54
CIRBP-233ENST00000591622 PPP2R2DQ66LE6 453 aa18.43■□□□□ 0.54
CIRBP-233ENST00000591622 NOSTRINQ8IVI9 506 aa18.43■□□□□ 0.54
CIRBP-233ENST00000591622 MYLIPQ8WY64 445 aa18.43■□□□□ 0.54
CIRBP-233ENST00000591622 AGO3Q9H9G7 860 aaKnown RBP18.43■□□□□ 0.54
CIRBP-233ENST00000591622 SEPT9Q9UHD8 586 aaPredicted RBP18.43■□□□□ 0.54
CIRBP-233ENST00000591622 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.42■□□□□ 0.54
CIRBP-233ENST00000591622 DDX11L8A8MPP1 907 aa18.42■□□□□ 0.54
CIRBP-233ENST00000591622 DKC1O60832 514 aaKnown RBP eCLIP18.42■□□□□ 0.54
CIRBP-233ENST00000591622 P4HBP07237 508 aaKnown RBP18.42■□□□□ 0.54
CIRBP-233ENST00000591622 NCAPH2Q6IBW4 605 aa18.42■□□□□ 0.54
CIRBP-233ENST00000591622 EFCAB12Q6NXP0 572 aa18.42■□□□□ 0.54
CIRBP-233ENST00000591622 MYOCDQ8IZQ8 938 aa18.42■□□□□ 0.54
CIRBP-233ENST00000591622 LINC01465Q8N7H1 131 aa18.42■□□□□ 0.54
CIRBP-233ENST00000591622 MTMR9Q96QG7 549 aa18.42■□□□□ 0.54
CIRBP-233ENST00000591622 RAD9AQ99638 391 aa18.42■□□□□ 0.54
CIRBP-233ENST00000591622 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 TMEM150BA6NC51 233 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.54
CIRBP-233ENST00000591622 TMOD1P28289 359 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 CD52P31358 61 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 MCM7P33993 719 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 TXKP42681 527 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 CLCN3P51790 818 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 TBC1D8BQ0IIM8 1120 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 ORC2Q13416 577 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-233ENST00000591622 MTERF2Q49AM1 385 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 FAM117BQ6P1L5 589 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 ANO5Q75V66 913 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 LRRC71Q8N4P6 559 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 TTC12Q9H892 705 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-233ENST00000591622 CDHR5Q9HBB8 845 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 PADI3Q9ULW8 664 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 GINS2Q9Y248 185 aa18.41■□□□□ 0.54
CIRBP-233ENST00000591622 KAT6AQ92794 2004 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 VTNP04004 478 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 GJB2P29033 226 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 TRAPPC10P48553 1259 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 KIZQ2M2Z5 673 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 TOP1MTQ969P6 601 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 CEP89Q96ST8 783 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 MAP7D2Q96T17 732 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 LXNQ9BS40 222 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 TMEM60Q9H2L4 133 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 PRDM12Q9H4Q4 367 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 SUGCTQ9HAC7 445 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 RGL1Q9NZL6 768 aa18.4■□□□□ 0.54
CIRBP-233ENST00000591622 WRAP73Q9P2S5 460 aaPredicted RBP18.4■□□□□ 0.54
CIRBP-233ENST00000591622 LCHNA4D1U4 455 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 ENPP3O14638 875 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 GPR32O75388 356 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 ARHGEF15O94989 841 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 FOSL2P15408 326 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 CRYBB1P53674 252 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-233ENST00000591622 TAP1Q03518 808 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 PAK2Q13177 524 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 ZNF174Q15697 407 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 C4orf19Q8IY42 314 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 ZNF710Q8N1W2 664 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 TMEM40Q8WWA1 233 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 DYDC2Q96IM9 177 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 PPP1R16BQ96T49 567 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 SH2D3AQ9BRG2 576 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 FTHL17Q9BXU8 183 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 ZSWIM4Q9H7M6 989 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 NOL7Q9UMY1 257 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms