RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PSTPIP2Q9H939 334 aa10.81□□□□□ -0.68
BRCA1-226ENST00000591534 RAPGEFL1Q9UHV5 662 aa10.81□□□□□ -0.68
BRCA1-226ENST00000591534 RRN3P2A6NIE6 340 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 SPDYE3A6NKU9 549 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 M0QZ92 97 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 MCM5P33992 734 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 CTNNB1P35222 781 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 TCF7P36402 384 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-226ENST00000591534 SP4Q02446 784 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 PPFIA1Q13136 1202 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 PTPRNQ16849 979 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 MSS51Q4VC12 460 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 IER5Q5VY09 327 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 ZNF654Q8IZM8 581 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 IGDCC4Q8TDY8 1250 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 LMBR1Q8WVP7 490 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 PABPC5Q96DU9 382 aaKnown RBP10.8□□□□□ -0.68
BRCA1-226ENST00000591534 TMEM87BQ96K49 555 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 SMARCAD1Q9H4L7 1026 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 ALG2Q9H553 416 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 AZI2Q9H6S1 392 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 UPF2Q9HAU5 1272 aaKnown RBP10.8□□□□□ -0.68
BRCA1-226ENST00000591534 PRKAG3Q9UGI9 489 aa10.8□□□□□ -0.68
BRCA1-226ENST00000591534 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-226ENST00000591534 PRR33A8MZF0 331 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 C5orf67F2Z3F1 127 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 SGSM2O43147 1006 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 DXOO77932 396 aaKnown RBP10.79□□□□□ -0.68
BRCA1-226ENST00000591534 RFX1P22670 979 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 ADAM17P78536 824 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 MTMR1Q13613 665 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-226ENST00000591534 USP17L6PQ6QN14 398 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 SYNE3Q6ZMZ3 975 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-226ENST00000591534 NEK9Q8TD19 979 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 MAP4K1Q92918 833 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 POP1Q99575 1024 aaKnown RBP10.79□□□□□ -0.68
BRCA1-226ENST00000591534 PLVAPQ9BX97 442 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 FTHL17Q9BXU8 183 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 FKBPLQ9UIM3 349 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 TUBE1Q9UJT0 475 aa10.79□□□□□ -0.68
BRCA1-226ENST00000591534 KIAA1217Q5T5P2 1943 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 MEIS2O14770 477 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 PRC1O43663 620 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 STAG3L1P0CL83 205 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 GHRP10912 638 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 BMPR1AP36894 532 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 SEMA3FQ13275 785 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 BTG3Q14201 252 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-226ENST00000591534 GRIK4Q16099 956 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 SLC35G1Q2M3R5 365 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 NAALADL2Q58DX5 795 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 TCEAL5Q5H9L2 206 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 TSHZ1Q6ZSZ6 1077 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 TRIM50Q86XT4 487 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 LY9Q9HBG7 655 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 EVA1BQ9NVM1 165 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 CLDND1Q9NY35 253 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 SLC12A7Q9Y666 1083 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 SQORQ9Y6N5 450 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 ADGRA3Q8IWK6 1321 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 MYH6P13533 1939 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 TET1Q8NFU7 2136 aa10.78□□□□□ -0.68
BRCA1-226ENST00000591534 TRIP12Q14669 1992 aaPredicted RBP10.77□□□□□ -0.68
BRCA1-226ENST00000591534 H3BQ06 376 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-226ENST00000591534 ENPP3O14638 875 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 DCXO43602 365 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 CHRNA1P02708 482 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 FBXO45P0C2W1 286 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 LIFRP42702 1097 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 MMP16P51512 607 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 BMP2KLQ5H9B9 411 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 ODR4Q5SWX8 454 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 MB21D2Q8IYB1 491 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-226ENST00000591534 NME8Q8N427 588 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 UIMC1Q96RL1 719 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 SDF4Q9BRK5 362 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 GLT8D2Q9H1C3 349 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 KCNH6Q9H252 994 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 BCAS3Q9H6U6 928 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 JPH1Q9HDC5 661 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-226ENST00000591534 JADE2Q9NQC1 790 aa10.77□□□□□ -0.69
BRCA1-226ENST00000591534 RBM8AQ9Y5S9 174 aaKnown RBP10.77□□□□□ -0.69
BRCA1-226ENST00000591534 TCF20Q9UGU0 1960 aaKnown RBP10.76□□□□□ -0.69
BRCA1-226ENST00000591534 MBLAC1A4D2B0 266 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-226ENST00000591534 FAM86C2PA6NEL3 165 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 ADH1BP00325 375 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 FOSP01100 380 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-226ENST00000591534 CCNYL3P0C7X3 344 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 IL9P15248 144 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 KCNA2P16389 499 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 ITGB5P18084 799 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 MARK3P27448 753 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 SLC26A2P50443 739 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 ANTXR2P58335 489 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 MRPS6P82932 125 aaKnown RBP10.76□□□□□ -0.69
BRCA1-226ENST00000591534 KCNH2Q12809 1159 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 LPIN1Q14693 890 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms