RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ATP2B1P20020 1258 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 KCNJ6P48051 423 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 RABGGTBP53611 331 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 WDR5P61964 334 aaKnown RBP10.34□□□□□ -0.75
DNMT1-223ENST00000591239 MRPS6P82932 125 aaKnown RBP10.34□□□□□ -0.75
DNMT1-223ENST00000591239 RAB30Q15771 203 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 CALCRLQ16602 461 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 IER5Q5VY09 327 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 NOSTRINQ8IVI9 506 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 KIAA0319LQ8IZA0 1049 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 NME8Q8N427 588 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 SEPT8Q92599 483 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 SLC9A7Q96T83 725 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 IFIH1Q9BYX4 1025 aaKnown RBP10.34□□□□□ -0.75
DNMT1-223ENST00000591239 TTYH1Q9H313 450 aaPredicted RBP10.34□□□□□ -0.75
DNMT1-223ENST00000591239 PCDHA12Q9UN75 941 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 CEP131Q9UPN4 1083 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 CDY2AQ9Y6F7 541 aa10.34□□□□□ -0.75
DNMT1-223ENST00000591239 WDR81Q562E7 1941 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 M0QZ92 97 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 MAGEB2O15479 319 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 C22orf31O95567 290 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 P4HBP07237 508 aaKnown RBP10.33□□□□□ -0.76
DNMT1-223ENST00000591239 U2AF2P26368 475 aaKnown RBP eCLIP10.33□□□□□ -0.76
DNMT1-223ENST00000591239 GJB2P29033 226 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 MCM7P33993 719 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 QARSP47897 775 aaKnown RBP10.33□□□□□ -0.76
DNMT1-223ENST00000591239 PSMC5P62195 406 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 DEFB103AP81534 67 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 SPIRE1Q08AE8 756 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 TMEM62Q0P6H9 643 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 LPIN1Q14693 890 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 XKR3Q5GH77 459 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 FBXO47Q5MNV8 452 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 HERC6Q8IVU3 1022 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 METTL13Q8N6R0 699 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 BANK1Q8NDB2 785 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 APBB2Q92870 758 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 MTMR9Q96QG7 549 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 ZNF576Q9H609 170 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 TTC12Q9H892 705 aaPredicted RBP10.33□□□□□ -0.76
DNMT1-223ENST00000591239 SMC3Q9UQE7 1217 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 YBX2Q9Y2T7 364 aaKnown RBP10.33□□□□□ -0.76
DNMT1-223ENST00000591239 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.33□□□□□ -0.76
DNMT1-223ENST00000591239 PCDHA11Q9Y5I1 949 aa10.33□□□□□ -0.76
DNMT1-223ENST00000591239 TMEM150BA6NC51 233 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 DDX11L8A8MPP1 907 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 KIF28PB7ZC32 967 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 STBD1O95210 358 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 MYOGP15173 224 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 TXKP42681 527 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 TBC1D8BQ0IIM8 1120 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 EPHA7Q15375 998 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 TARBP2Q15633 366 aaKnown RBP10.32□□□□□ -0.76
DNMT1-223ENST00000591239 NCAPH2Q6IBW4 605 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 EFCAB12Q6NXP0 572 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.32□□□□□ -0.76
DNMT1-223ENST00000591239 TSHZ1Q6ZSZ6 1077 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 TMCO2Q7Z6W1 182 aaPredicted RBP10.32□□□□□ -0.76
DNMT1-223ENST00000591239 GUCD1Q96NT3 240 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 NIFKQ9BYG3 293 aaKnown RBP10.32□□□□□ -0.76
DNMT1-223ENST00000591239 CELF4Q9BZC1 486 aaKnown RBP10.32□□□□□ -0.76
DNMT1-223ENST00000591239 TMEM60Q9H2L4 133 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 NKX2-4Q9H2Z4 354 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 AGO3Q9H9G7 860 aaKnown RBP10.32□□□□□ -0.76
DNMT1-223ENST00000591239 SLC28A3Q9HAS3 691 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 RGL1Q9NZL6 768 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 SEPT9Q9UHD8 586 aaPredicted RBP10.32□□□□□ -0.76
DNMT1-223ENST00000591239 TRPV2Q9Y5S1 764 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 SQORQ9Y6N5 450 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 UNC80Q8N2C7 3258 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 KDM3AQ9Y4C1 1321 aa10.32□□□□□ -0.76
DNMT1-223ENST00000591239 REV3LO60673 3130 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 EVPLQ92817 2033 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 H3BQV1 296 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 TLL1O43897 1013 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 DKC1O60832 514 aaKnown RBP eCLIP10.31□□□□□ -0.76
DNMT1-223ENST00000591239 GJB5O95377 273 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 VTNP04004 478 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 TMOD1P28289 359 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 CD52P31358 61 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 TRAPPC10P48553 1259 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 CLCN3P51790 818 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 ORC2Q13416 577 aaPredicted RBP10.31□□□□□ -0.76
DNMT1-223ENST00000591239 CUL4AQ13619 759 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 ZNF174Q15697 407 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 KIZQ2M2Z5 673 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 MTERF2Q49AM1 385 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 TTC38Q5R3I4 469 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 MCTP1Q6DN14 999 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 ANO5Q75V66 913 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 LRRC71Q8N4P6 559 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 LINC01465Q8N7H1 131 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 USP38Q8NB14 1042 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 DYDC2Q96IM9 177 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 CEP89Q96ST8 783 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 CDX2Q99626 313 aaPredicted RBP10.31□□□□□ -0.76
DNMT1-223ENST00000591239 EIF2AK1Q9BQI3 630 aaKnown RBP10.31□□□□□ -0.76
DNMT1-223ENST00000591239 SH2D3AQ9BRG2 576 aa10.31□□□□□ -0.76
DNMT1-223ENST00000591239 LXNQ9BS40 222 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms