RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 BANK1Q8NDB2 785 aa25.16■■□□□ 1.62
MBD3-208ENST00000590830 IFIH1Q9BYX4 1025 aaKnown RBP25.16■■□□□ 1.62
MBD3-208ENST00000590830 CDHR5Q9HBB8 845 aa25.16■■□□□ 1.62
MBD3-208ENST00000590830 COL6A3P12111 3177 aa25.15■■□□□ 1.62
MBD3-208ENST00000590830 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.15■■□□□ 1.62
MBD3-208ENST00000590830 TMEM150BA6NC51 233 aa25.15■■□□□ 1.62
MBD3-208ENST00000590830 EFCAB14O75071 495 aa25.15■■□□□ 1.62
MBD3-208ENST00000590830 RPLP2P05387 115 aaKnown RBP25.15■■□□□ 1.62
MBD3-208ENST00000590830 TARBP2Q15633 366 aaKnown RBP25.15■■□□□ 1.62
MBD3-208ENST00000590830 MYLIPQ8WY64 445 aa25.15■■□□□ 1.62
MBD3-208ENST00000590830 CEP89Q96ST8 783 aa25.15■■□□□ 1.62
MBD3-208ENST00000590830 CELF4Q9BZC1 486 aaKnown RBP25.15■■□□□ 1.62
MBD3-208ENST00000590830 FOXP1Q9H334 677 aaPredicted RBP25.15■■□□□ 1.62
MBD3-208ENST00000590830 TRPV2Q9Y5S1 764 aa25.15■■□□□ 1.62
MBD3-208ENST00000590830 KIF28PB7ZC32 967 aa25.14■■□□□ 1.62
MBD3-208ENST00000590830 CA3P07451 260 aa25.14■■□□□ 1.62
MBD3-208ENST00000590830 ATP2B1P20020 1258 aa25.14■■□□□ 1.62
MBD3-208ENST00000590830 LINC01465Q8N7H1 131 aa25.14■■□□□ 1.62
MBD3-208ENST00000590830 MTMR9Q96QG7 549 aa25.14■■□□□ 1.62
MBD3-208ENST00000590830 NIFKQ9BYG3 293 aaKnown RBP25.14■■□□□ 1.62
MBD3-208ENST00000590830 SLC28A3Q9HAS3 691 aa25.14■■□□□ 1.62
MBD3-208ENST00000590830 WRAP73Q9P2S5 460 aaPredicted RBP25.14■■□□□ 1.62
MBD3-208ENST00000590830 MARCH6O60337 910 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 GJB5O95377 273 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 MCM2P49736 904 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 XKR3Q5GH77 459 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 TSHZ1Q6ZSZ6 1077 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 SLFN12Q8IYM2 578 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 METTL13Q8N6R0 699 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 APBB2Q92870 758 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 SH2D3AQ9BRG2 576 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 TMEM60Q9H2L4 133 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 CEP131Q9UPN4 1083 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 PTPRSQ13332 1948 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 GBF1Q92538 1859 aa25.13■■□□□ 1.61
MBD3-208ENST00000590830 KDM3AQ9Y4C1 1321 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 LCHNA4D1U4 455 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 MAGEB2O15479 319 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 TLL1O43897 1013 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 BAG4O95429 457 aaKnown RBP25.12■■□□□ 1.61
MBD3-208ENST00000590830 CD52P31358 61 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 PSMC5P62195 406 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 EPHA7Q15375 998 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 CALCRLQ16602 461 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 EFCAB12Q6NXP0 572 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 FAM117BQ6P1L5 589 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 RGL1Q9NZL6 768 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 MYH9P35579 1960 aaKnown RBP25.12■■□□□ 1.61
MBD3-208ENST00000590830 SIP14410 1827 aa25.12■■□□□ 1.61
MBD3-208ENST00000590830 DDX11L8A8MPP1 907 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 ENPP3O14638 875 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 NEMFO60524 1076 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 QARSP47897 775 aaKnown RBP25.11■■□□□ 1.61
MBD3-208ENST00000590830 CLCN3P51790 818 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 PPP2R2DQ66LE6 453 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 NCAPH2Q6IBW4 605 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 ANO5Q75V66 913 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 SPRED2Q7Z698 418 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 RTN4RL1Q86UN2 441 aaPredicted RBP25.11■■□□□ 1.61
MBD3-208ENST00000590830 NOSTRINQ8IVI9 506 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 LRRC71Q8N4P6 559 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 TMEM40Q8WWA1 233 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 PRDM12Q9H4Q4 367 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 SQORQ9Y6N5 450 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 CHD7Q9P2D1 2997 aa25.11■■□□□ 1.61
MBD3-208ENST00000590830 WDR81Q562E7 1941 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 GPR32O75388 356 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 AMHP03971 560 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 VTNP04004 478 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 P4HBP07237 508 aaKnown RBP25.1■■□□□ 1.61
MBD3-208ENST00000590830 U2AF2P26368 475 aaKnown RBP eCLIP25.1■■□□□ 1.61
MBD3-208ENST00000590830 MCM7P33993 719 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 TAP1Q03518 808 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 ZNF174Q15697 407 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 MTERF2Q49AM1 385 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 MYOCDQ8IZQ8 938 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 ZNF579Q8NAF0 562 aaKnown RBP25.1■■□□□ 1.61
MBD3-208ENST00000590830 TOP1MTQ969P6 601 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 PPP1R16BQ96T49 567 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 RAD9AQ99638 391 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 ZBED2Q9BTP6 218 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 SEPT9Q9UHD8 586 aaPredicted RBP25.1■■□□□ 1.61
MBD3-208ENST00000590830 PADI3Q9ULW8 664 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 PCDHA12Q9UN75 941 aa25.1■■□□□ 1.61
MBD3-208ENST00000590830 M0QZ92 97 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 GJB2P29033 226 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 TXKP42681 527 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 DRP2Q13474 957 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 KIZQ2M2Z5 673 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 TMEM266Q2M3C6 531 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 USP38Q8NB14 1042 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 LINC01599Q8WXQ3 324 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 DYDC2Q96IM9 177 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 TTC12Q9H892 705 aaPredicted RBP25.09■■□□□ 1.61
MBD3-208ENST00000590830 GINS2Q9Y248 185 aa25.09■■□□□ 1.61
MBD3-208ENST00000590830 NOC2LQ9Y3T9 749 aaKnown RBP25.09■■□□□ 1.61
MBD3-208ENST00000590830 IGKV6-21A0A0C4DH24 114 aa25.08■■□□□ 1.61
MBD3-208ENST00000590830 SLITRK3O94933 977 aa25.08■■□□□ 1.61
MBD3-208ENST00000590830 TOB1P50616 345 aaPredicted RBP25.08■■□□□ 1.61
MBD3-208ENST00000590830 ADGRE1Q14246 886 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms