RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 HIPK3Q9H422 1215 aa13.64□□□□□ -0.23
GPATCH1-202ENST00000590062 ANKEF1Q9NU02 776 aa13.64□□□□□ -0.23
GPATCH1-202ENST00000590062 SEPT9Q9UHD8 586 aaPredicted RBP13.64□□□□□ -0.23
GPATCH1-202ENST00000590062 TUBE1Q9UJT0 475 aa13.64□□□□□ -0.23
GPATCH1-202ENST00000590062 DBR1Q9UK59 544 aaKnown RBP13.64□□□□□ -0.23
GPATCH1-202ENST00000590062 TBX21Q9UL17 535 aa13.64□□□□□ -0.23
GPATCH1-202ENST00000590062 LTBP2Q14767 1821 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 TREHO43280 583 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 C22orf31O95567 290 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 RPLP2P05387 115 aaKnown RBP13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 NCLP19338 710 aaKnown RBP13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 UBA7P41226 1012 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 IGBP1P78318 339 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 ZNF200P98182 395 aaPredicted RBP13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 GRB10Q13322 594 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 POTEGQ6S5H5 508 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 MTHFD1LQ6UB35 978 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 OTUD6AQ7L8S5 288 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 CABP7Q86V35 215 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 LINC01465Q8N7H1 131 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 CAGE1Q8TC20 777 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 SYMPKQ92797 1274 aaKnown RBP13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 SPATA32Q96LK8 384 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 PNMA5Q96PV4 448 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 NACC1Q96RE7 527 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 NT5C3AQ9H0P0 336 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 CYP26B1Q9NR63 512 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 PCDHA7Q9UN72 937 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 PCDHA2Q9Y5H9 948 aa13.63□□□□□ -0.23
GPATCH1-202ENST00000590062 TNRC18O15417 2968 aaPredicted RBP13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 TANC1Q9C0D5 1861 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 IGKV6-21A0A0C4DH24 114 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 TMEM150BA6NC51 233 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 TRIM43BA6NCK2 446 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 H0YGN5 161 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 MAGEB2O15479 319 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 CAND2O75155 1236 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 CYP2C9P11712 490 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 RFC5P40937 340 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 ME1P48163 572 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 RARRES1P49788 294 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 TRIM71Q2Q1W2 868 aaKnown RBP13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 PRPF38BQ5VTL8 546 aaKnown RBP13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 PLA2G4FQ68DD2 849 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 SHC4Q6S5L8 630 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 USP49Q70CQ1 688 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 SH3RF1Q7Z6J0 888 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 RETREG2Q8NC44 543 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 TRAPPC12Q8WVT3 735 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 DHX38Q92620 1227 aaKnown RBP13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 TRIM43Q96BQ3 446 aaPredicted RBP13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 EPSTI1Q96J88 318 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 PPP1R12CQ9BZL4 782 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 DDX19AQ9NUU7 478 aaKnown RBP13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 KIAA1024Q9UPX6 916 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 KAT6AQ92794 2004 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 TCHHQ07283 1943 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 DNAH12Q6ZR08 3092 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 ARID2Q68CP9 1835 aa13.62□□□□□ -0.23
GPATCH1-202ENST00000590062 LOXHD1Q8IVV2 1947 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 PDE4DIPQ5VU43 2346 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 SMIM35A0A1B0GVV1 85 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 ZBTB39O15060 712 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 MAFO75444 373 aaPredicted RBP13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 TIMP1P01033 207 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 KLRC1P26715 233 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 TXLNAP40222 546 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 NPEPPSP55786 919 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 MTERF2Q49AM1 385 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 SPECC1Q5M775 1068 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 ADALQ6DHV7 355 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 CLEC17AQ6ZS10 378 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 TRMT1LQ7Z2T5 733 aaKnown RBP13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 RSPH3Q86UC2 560 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 EXOC8Q8IYI6 725 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 WNT8BQ93098 351 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 CEP170P1Q96L14 293 aa13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 CCDC43Q96MW1 224 aaKnown RBP13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 JPH2Q9BR39 696 aaPredicted RBP13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 DHX33Q9H6R0 707 aaKnown RBP13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 TRIP12Q14669 1992 aaPredicted RBP13.61□□□□□ -0.23
GPATCH1-202ENST00000590062 FAM237AA0A1B0GTK4 181 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 A0A1W2PQ27 194 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 A0A1W2PQ64 194 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 A0A1W2PQD8 194 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 GAS2O43903 313 aaKnown RBP13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 DGAT1O75907 488 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 EYA4O95677 639 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 TBC1D8BQ0IIM8 1120 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 KARSQ15046 597 aaKnown RBP13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 XKR9Q5GH70 373 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 RESP18Q5W5W9 173 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 MFSD5Q6N075 450 aa13.6□□□□□ -0.23
GPATCH1-202ENST00000590062 RUFY4Q6ZNE9 571 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms