RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 BACE1P56817 501 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 METTL24Q5JXM2 366 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 PRSS36Q5K4E3 855 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 PSRC1Q6PGN9 363 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-209ENST00000589941 BEND4Q6ZU67 534 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 ANKRD33Q7Z3H0 272 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 TSR2Q969E8 191 aaKnown RBP9.54□□□□□ -0.88
SMAD4-209ENST00000589941 SUCLG2Q96I99 432 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 C7orf69Q9H7B7 122 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 DNAJC18Q9H819 358 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 XPNPEP3Q9NQH7 507 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 FAM86C1Q9NVL1 165 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 CRIM1Q9NZV1 1036 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 STOML1Q9UBI4 398 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 CYP8B1Q9UNU6 501 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 HIF3AQ9Y2N7 669 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 PCDHB5Q9Y5E4 795 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 DNAH14Q0VDD8 3507 aa9.54□□□□□ -0.88
SMAD4-209ENST00000589941 COBLO75128 1261 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 PDE8BO95263 885 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 CYP2C18P33260 490 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 BTDP43251 543 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 LIG3P49916 1009 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 USP11P51784 963 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 ID3Q02535 119 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 LRRC14Q15048 493 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 CLEC10AQ8IUN9 316 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 FAM178BQ8IXR5 827 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 WDR66Q8TBY9 1149 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 GAL3ST3Q96A11 431 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 FANCD2OSQ96PS1 177 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 FAM83CQ9BQN1 747 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 KCNH6Q9H252 994 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 TMOD4Q9NZQ9 345 aa9.53□□□□□ -0.88
SMAD4-209ENST00000589941 CACNA1GO43497 2377 aa9.52□□□□□ -0.88
SMAD4-209ENST00000589941 ROBO3Q96MS0 1386 aa9.52□□□□□ -0.88
SMAD4-209ENST00000589941 CFAP47Q6ZTR5 3102 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 MYADML2A6NDP7 307 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 ADAMTS4O75173 837 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 CA3P07451 260 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 SLFN14P0C7P3 912 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 TAL1P17542 331 aaPredicted RBP9.52□□□□□ -0.89
SMAD4-209ENST00000589941 POU3F3P20264 500 aaPredicted RBP9.52□□□□□ -0.89
SMAD4-209ENST00000589941 ADORA2AP29274 412 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 ASPAP45381 313 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 RHBDL3P58872 404 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 GNAI1P63096 354 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 ZC3H12AQ5D1E8 599 aaKnown RBP9.52□□□□□ -0.89
SMAD4-209ENST00000589941 BEND3Q5T5X7 828 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 OLFML2BQ68BL8 750 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 OTOP2Q7RTS6 562 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 ZNF384Q8TF68 577 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 RUNDC1Q96C34 613 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 VWCEQ96DN2 955 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 NOC4LQ9BVI4 516 aaKnown RBP9.52□□□□□ -0.89
SMAD4-209ENST00000589941 STK31Q9BXU1 1019 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 BCL11AQ9H165 835 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 DISC1Q9NRI5 854 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 TLR6Q9Y2C9 796 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 MYH8P13535 1937 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 KIF16BQ96L93 1317 aa9.52□□□□□ -0.89
SMAD4-209ENST00000589941 DCDC2CA8MYV0 355 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 RBAK-RBAKDNI3L0D1 243 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 GRM8O00222 908 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 LPXNO60711 386 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 TFE3P19532 575 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-209ENST00000589941 FSTP19883 344 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 RAB6AP20340 208 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 ZYXQ15942 572 aaKnown RBP9.51□□□□□ -0.89
SMAD4-209ENST00000589941 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 TET1Q8NFU7 2136 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 EZH1Q92800 747 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-209ENST00000589941 TOX2Q96NM4 488 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 ACSS3Q9H6R3 686 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 AS3MTQ9HBK9 375 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 IL23AQ9NPF7 189 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 PCDHA4Q9UN74 947 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 RABGAP1Q9Y3P9 1069 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 MROH7-TTC4A0A0A0MT08 1334 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 SALL1Q9NSC2 1324 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 NLRC5Q86WI3 1866 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 NAV1Q8NEY1 1877 aa9.51□□□□□ -0.89
SMAD4-209ENST00000589941 DCXO43602 365 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 GLRX3O76003 335 aaKnown RBP9.5□□□□□ -0.89
SMAD4-209ENST00000589941 NFICP08651 508 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 CDK8P49336 464 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 ACLYP53396 1101 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 TCF15Q12870 199 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 GRB10Q13322 594 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 PUM3Q15397 648 aaKnown RBP9.5□□□□□ -0.89
SMAD4-209ENST00000589941 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-209ENST00000589941 ANKRD44Q8N8A2 993 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-209ENST00000589941 ALG13Q9NP73 1137 aaKnown RBP9.5□□□□□ -0.89
SMAD4-209ENST00000589941 STARD7Q9NQZ5 370 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 PCDHA11Q9Y5I1 949 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 SYNRGQ9UMZ2 1314 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 CACNA1HO95180 2353 aa9.5□□□□□ -0.89
SMAD4-209ENST00000589941 RARBP10826 455 aa9.49□□□□□ -0.89
SMAD4-209ENST00000589941 ALADP13716 330 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms