RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PIK3CAP42336 1068 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 RNPC3Q96LT9 517 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 TLK1Q9UKI8 766 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 PCDHB4Q9Y5E5 795 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 PITPNM2Q9BZ72 1349 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 SHROOM2Q13796 1616 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 SERPINB4P48594 390 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 RAD9BQ6WBX8 426 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 USP6NLQ92738 828 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 TFCP2L1Q9NZI6 479 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 PLEKHG1Q9ULL1 1385 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 TJP3O95049 919 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 TNNC2P02585 160 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 SAT1P21673 171 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 PHKA1P46020 1223 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 GPC5P78333 572 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 PTPN12Q05209 780 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 DMP1Q13316 513 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 FRMPD2Q68DX3 1309 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 KRT38O76015 456 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 UFL1O94874 794 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 STAT4Q14765 748 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 RAB44Q7Z6P3 723 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 RBM17Q96I25 401 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 GJB4Q9NTQ9 266 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 EHD2Q9NZN4 543 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 CLIC2O15247 247 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 PLA2G4BP0C869 781 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 DARS2Q6PI48 645 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 NBPF3Q9H094 633 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 SPC25Q9HBM1 224 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 ADD3Q9UEY8 706 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 ACADSP16219 412 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 ASPRV1Q53RT3 343 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 PDXDC1Q6P996 788 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 NOA1Q8NC60 698 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 TEKT4Q8WW24 435 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 GPHNQ9NQX3 736 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 A6NJR5 290 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 DNAJC6O75061 913 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 BCAMP50895 628 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 SEC24CP53992 1094 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 SNF8Q96H20 258 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 MTA3Q9BTC8 594 aa15.66■□□□□ 0.1
SMARCA4-214ENST00000589677 CTCFP49711 727 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 KIF9Q9HAQ2 790 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 LCMT1Q9UIC8 334 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 MED14O60244 1454 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 ATP7BP35670 1465 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 CASP1P29466 404 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 NEK2P51955 445 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 XKR9Q5GH70 373 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 BZW1Q7L1Q6 419 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 DEPDC1BQ8WUY9 529 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 C8orf37Q96NL8 207 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 PNKPQ96T60 521 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 PUS3Q9BZE2 481 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 BTG4Q9NY30 223 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 TRIM33Q9UPN9 1127 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 SMG5Q9UPR3 1016 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 TTLL3Q9Y4R7 772 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 CDHR2Q9BYE9 1310 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 HDAC4P56524 1084 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 CYP4A11Q02928 519 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 LLGL1Q15334 1064 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 DNAJC24Q6P3W2 148 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 TRMT10CQ7L0Y3 403 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 SLC26A7Q8TE54 656 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 CEP19Q96LK0 163 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 ATP6V0A4Q9HBG4 840 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 ZNF277Q9NRM2 450 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 GGA1Q9UJY5 639 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 SNUPNO95149 360 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 HSPA4LO95757 839 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 KRT14P02533 472 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 EPHB1P54762 984 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 AP1B1Q10567 949 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 PRPSAP1Q14558 356 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 NLRX1Q86UT6 975 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 POMGNT1Q8WZA1 660 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 CFAP36Q96G28 342 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 RBM41Q96IZ5 413 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 ANKRD27Q96NW4 1050 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 SEPT10Q9P0V9 454 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 DLGAP2Q9P1A6 1054 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 ATP10DQ9P241 1426 aa15.65■□□□□ 0.1
SMARCA4-214ENST00000589677 KDM1AO60341 852 aa15.64■□□□□ 0.1
SMARCA4-214ENST00000589677 MARK3P27448 753 aa15.64■□□□□ 0.1
SMARCA4-214ENST00000589677 CHP1Q99653 195 aa15.64■□□□□ 0.1
SMARCA4-214ENST00000589677 TBC1D23Q9NUY8 699 aa15.64■□□□□ 0.1
SMARCA4-214ENST00000589677 AMACRQ9UHK6 382 aa15.64■□□□□ 0.1
SMARCA4-214ENST00000589677 IPO11Q9UI26 975 aaKnown RBP15.64■□□□□ 0.1
SMARCA4-214ENST00000589677 DNAJC12Q9UKB3 198 aa15.64■□□□□ 0.1
SMARCA4-214ENST00000589677 ZBBXA8MT70 800 aa15.64■□□□□ 0.09
SMARCA4-214ENST00000589677 POLR2MP0CAP2 368 aa15.64■□□□□ 0.09
SMARCA4-214ENST00000589677 KCNB1Q14721 858 aa15.64■□□□□ 0.09
SMARCA4-214ENST00000589677 DNAL1Q4LDG9 190 aa15.64■□□□□ 0.09
SMARCA4-214ENST00000589677 CCDC137Q6PK04 289 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms