RNA–Protein interactions for RNA: ENST00000588980.5

U2AF1L4-211, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-211	ENST00000588980	SH3RF1	Q7Z6J0	888 aa		13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	TPH2	Q8IWU9	490 aa		13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	ERMN	Q8TAM6	284 aa		13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CALML4	Q96GE6	196 aa		13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PCYT2	Q99447	389 aa		13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	MLXIP	Q9HAP2	919 aa		13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	IMPACT	Q9P2X3	320 aa		13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	SAMM50	Q9Y512	469 aa		13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PCDHA10	Q9Y5I2	948 aa		13.56	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	GOLGA6L19	H0YKK7	550 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	ADCY3	O60266	1144 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CASP1	P29466	404 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	SFN	P31947	248 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	STAT6	P42226	847 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	JAK3	P52333	1124 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	TNFAIP2	Q03169	654 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	ZSCAN26	Q16670	478 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	HAUS3	Q68CZ6	603 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CKAP2L	Q8IYA6	745 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CNNM3	Q8NE01	707 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	RASSF8	Q8NHQ8	419 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PAGE5	Q96GU1	130 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	GPR20	Q99678	358 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	TUFT1	Q9NNX1	390 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	GNE	Q9Y223	722 aa	Known RBP	13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CASP8AP2	Q9UKL3	1982 aa		13.55	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	IGKV6D-21	A0A0A0MT36	114 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	TULP1	O00294	542 aa	Predicted RBP	13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	ZNF862	O60290	1169 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	STBD1	O95210	358 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	P4HB	P07237	508 aa	Known RBP	13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	SUPT20HL2	P0C7V6	817 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PRR29	P0C7W0	189 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	GTF2A1	P52655	376 aa	Predicted RBP	13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	MCM6	Q14566	821 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	ARHGAP29	Q52LW3	1261 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	MFSD14C	Q5VZR4	134 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	SWSAP1	Q6NVH7	229 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	RDM1	Q8NG50	284 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	NEK11	Q8NG66	645 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	EXOC4	Q96A65	974 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CDK5RAP3	Q96JB5	506 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	SPATA33	Q96N06	139 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	LXN	Q9BS40	222 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	TRIM17	Q9Y577	477 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CTAGE5	O15320	804 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	SLC26A4	O43511	780 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	GH1	P01241	217 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	ATP4A	P20648	1035 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	GUCY2C	P25092	1073 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	AFM	P43652	599 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	GOLGA6L1	Q8N7Z2	621 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	RAET1E	Q8TD07	263 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PIGO	Q8TEQ8	1089 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	AFG1L	Q8WV93	481 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	SEPT1	Q8WYJ6	367 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	RAD54L	Q92698	747 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	SMARCE1	Q969G3	411 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	DNAJC25	Q9H1X3	360 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	KBTBD4	Q9NVX7	518 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	GABBR1	Q9UBS5	961 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PTCH2	Q9Y6C5	1203 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	STK24	Q9Y6E0	443 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CENPF	P49454	3210 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	KDM3A	Q9Y4C1	1321 aa		13.54	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	WDR81	Q562E7	1941 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	TMEM150B	A6NC51	233 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PSAP	P07602	524 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	QARS	P47897	775 aa	Known RBP	13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PNOC	Q13519	176 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	LAMC2	Q13753	1193 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	ARID5B	Q14865	1188 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	MAP3K21	Q5TCX8	1036 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	SRL	Q86TD4	932 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	TRMT44	Q8IYL2	757 aa	Known RBP	13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PXYLP1	Q8TE99	480 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	EMID1	Q96A84	441 aa	Predicted RBP	13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	NT5C3A	Q9H0P0	336 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	STK17A	Q9UEE5	414 aa		13.53	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	DYNC1LI2	O43237	492 aa	Predicted RBP	13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	HSPA8	P11142	646 aa	Known RBP	13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PRKAR2A	P13861	404 aa	Known RBP	13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CCND3	P30281	292 aa	Predicted RBP	13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	TCF7	P36402	384 aa	Predicted RBP	13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PSMC5	P62195	406 aa		13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	MIS18BP1	Q6P0N0	1132 aa		13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CEP57L1	Q8IYX8	460 aa		13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	NEK9	Q8TD19	979 aa		13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PYM1	Q9BRP8	204 aa	Known RBP	13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	ZSWIM4	Q9H7M6	989 aa		13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	TCEAL9	Q9UHQ7	104 aa		13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	FAM184B	Q9ULE4	1060 aa		13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	PHLPP2	Q6ZVD8	1323 aa		13.52	□□□□□ -0.24
U2AF1L4-211	ENST00000588980	CCP110	O43303	1012 aa		13.52	□□□□□ -0.25
U2AF1L4-211	ENST00000588980	LGR5	O75473	907 aa		13.52	□□□□□ -0.25
U2AF1L4-211	ENST00000588980	LYPLA2	O95372	231 aa		13.52	□□□□□ -0.25
U2AF1L4-211	ENST00000588980	HMGCR	P04035	888 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms