RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 RARRES1P49788 294 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 PPFIA1Q13136 1202 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 SNW1Q13573 536 aaKnown RBP22.35■■□□□ 1.17
DNMT1-216ENST00000588952 MCM6Q14566 821 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 MTERF2Q49AM1 385 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 CCDC73Q6ZRK6 1079 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 TNS4Q8IZW8 715 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 FMR1NBQ8N0W7 255 aaPredicted RBP22.35■■□□□ 1.17
DNMT1-216ENST00000588952 SLC43A3Q8NBI5 491 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 PAWRQ96IZ0 340 aaKnown RBP22.35■■□□□ 1.17
DNMT1-216ENST00000588952 BHMT2Q9H2M3 363 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 NRBP2Q9NSY0 501 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 SETD4Q9NVD3 440 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 DBR1Q9UK59 544 aaKnown RBP22.35■■□□□ 1.17
DNMT1-216ENST00000588952 DNM3Q9UQ16 869 aa22.35■■□□□ 1.17
DNMT1-216ENST00000588952 ACTN4O43707 911 aaKnown RBP22.34■■□□□ 1.17
DNMT1-216ENST00000588952 PLA2G4BP0C869 781 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 SYKP43405 635 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 SLC12A3P55017 1021 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 IGBP1P78318 339 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 ZNF200P98182 395 aaPredicted RBP22.34■■□□□ 1.17
DNMT1-216ENST00000588952 GRIK4Q16099 956 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 XKR9Q5GH70 373 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 MARCH8Q5T0T0 291 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 UBE2Q1Q7Z7E8 422 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 LMBR1Q8WVP7 490 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 CEP170P1Q96L14 293 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 CYP26B1Q9NR63 512 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 SERTAD1Q9UHV2 236 aa22.34■■□□□ 1.17
DNMT1-216ENST00000588952 A0A0U1RQG5 324 aaPredicted RBP22.33■■□□□ 1.17
DNMT1-216ENST00000588952 NR1I2O75469 434 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 XRCC6P12956 609 aaKnown RBP eCLIP22.33■■□□□ 1.17
DNMT1-216ENST00000588952 SOX10P56693 466 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 LONRF3Q496Y0 759 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 FAM47CQ5HY64 1035 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 ZNF484Q5JVG2 852 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 GDF6Q6KF10 455 aaPredicted RBP22.33■■□□□ 1.17
DNMT1-216ENST00000588952 NFRKBQ6P4R8 1299 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 OTUD6AQ7L8S5 288 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 SESTD1Q86VW0 696 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 C7orf31Q8N865 590 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 MTRQ99707 1265 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 C11orf49Q9H6J7 331 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 STK17AQ9UEE5 414 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 GTF2IRD1Q9UHL9 959 aa22.33■■□□□ 1.17
DNMT1-216ENST00000588952 GOLGA6L22H0YM25 854 aa22.32■■□□□ 1.16
DNMT1-216ENST00000588952 CAPN2P17655 700 aa22.32■■□□□ 1.16
DNMT1-216ENST00000588952 ATN1P54259 1190 aaPredicted RBP22.32■■□□□ 1.16
DNMT1-216ENST00000588952 ADAM17P78536 824 aa22.32■■□□□ 1.16
DNMT1-216ENST00000588952 FAM160A1Q05DH4 1040 aa22.32■■□□□ 1.16
DNMT1-216ENST00000588952 DHX8Q14562 1220 aaKnown RBP22.32■■□□□ 1.16
DNMT1-216ENST00000588952 KCTD17Q8N5Z5 321 aa22.32■■□□□ 1.16
DNMT1-216ENST00000588952 SYT2Q8N9I0 419 aaPredicted RBP22.32■■□□□ 1.16
DNMT1-216ENST00000588952 IQUBQ8NA54 791 aa22.32■■□□□ 1.16
DNMT1-216ENST00000588952 LARP4BQ92615 738 aaKnown RBP22.32■■□□□ 1.16
DNMT1-216ENST00000588952 RUSC1Q9BVN2 902 aa22.32■■□□□ 1.16
DNMT1-216ENST00000588952 BMP2KQ9NSY1 1161 aaPredicted RBP22.32■■□□□ 1.16
DNMT1-216ENST00000588952 COL1A2P08123 1366 aa22.32■■□□□ 1.16
DNMT1-216ENST00000588952 NRCAMQ92823 1304 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 DNAH12Q6ZR08 3092 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 C17orf102A2RUQ5 167 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 ARHGEF35A5YM69 484 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 ARVCFO00192 962 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 ZNF202O95125 648 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 C22orf31O95567 290 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 SSBP05455 408 aaKnown RBP eCLIP22.31■■□□□ 1.16
DNMT1-216ENST00000588952 CDK7P50613 346 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 SLC39A5Q6ZMH5 540 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 GPT2Q8TD30 523 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 STAMQ92783 540 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 CTAGE1Q96RT6 745 aa22.31■■□□□ 1.16
DNMT1-216ENST00000588952 LOXHD1Q8IVV2 1947 aa22.3■■□□□ 1.16
DNMT1-216ENST00000588952 CCDC85CA6NKD9 419 aa22.3■■□□□ 1.16
DNMT1-216ENST00000588952 TREHO43280 583 aa22.3■■□□□ 1.16
DNMT1-216ENST00000588952 USO1O60763 962 aaKnown RBP22.3■■□□□ 1.16
DNMT1-216ENST00000588952 ARSHQ5FYA8 562 aa22.3■■□□□ 1.16
DNMT1-216ENST00000588952 PADI6Q6TGC4 694 aa22.3■■□□□ 1.16
DNMT1-216ENST00000588952 GRAMD1CQ8IYS0 662 aa22.3■■□□□ 1.16
DNMT1-216ENST00000588952 DHX33Q9H6R0 707 aaKnown RBP22.3■■□□□ 1.16
DNMT1-216ENST00000588952 XPNPEP1Q9NQW7 623 aa22.3■■□□□ 1.16
DNMT1-216ENST00000588952 PDLIM7Q9NR12 457 aa22.3■■□□□ 1.16
DNMT1-216ENST00000588952 TRMT13Q9NUP7 481 aaKnown RBP22.3■■□□□ 1.16
DNMT1-216ENST00000588952 TRIP12Q14669 1992 aaPredicted RBP22.3■■□□□ 1.16
DNMT1-216ENST00000588952 NPHP3-ACAD11A0A0J9YXS1 232 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 MBLAC1A4D2B0 266 aaPredicted RBP22.29■■□□□ 1.16
DNMT1-216ENST00000588952 RRN3P2A6NIE6 340 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 SLFN14P0C7P3 912 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 CYP11B2P19099 503 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 KLRC1P26715 233 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 PTPN11Q06124 597 aaPredicted RBP22.29■■□□□ 1.16
DNMT1-216ENST00000588952 SNX17Q15036 470 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 RINT1Q6NUQ1 792 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 MTHFD1LQ6UB35 978 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 RUFY4Q6ZNE9 571 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 KRBA2Q6ZNG9 492 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 C1orf186Q6ZWK4 172 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 NECAB2Q7Z6G3 386 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 GPBP1Q86WP2 473 aa22.29■■□□□ 1.16
DNMT1-216ENST00000588952 CCDC43Q96MW1 224 aaKnown RBP22.29■■□□□ 1.16
DNMT1-216ENST00000588952 KBTBD4Q9NVX7 518 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms