RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 RABGAP1Q9Y3P9 1069 aa15.4■□□□□ 0.06
NEDD4L-223ENST00000588516 LRRIQ3A6PVS8 624 aaPredicted RBP15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 E9PMD0 336 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 PIK3CDO00329 1044 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 HSF2BPO75031 334 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 FLOT1O75955 427 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 ZNF76P36508 570 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 POLR2FP61218 127 aaKnown RBP15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 ICA1Q05084 483 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 PAK2Q13177 524 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 ABCB5Q2M3G0 1257 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 SYDE2Q5VT97 1194 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 HGSNATQ68CP4 663 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 FBXO46Q6PJ61 603 aaPredicted RBP15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 SYCE1Q8N0S2 351 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 CERS5Q8N5B7 392 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 AENQ8WTP8 325 aaKnown RBP15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 SCFD1Q8WVM8 642 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 SPAG5Q96R06 1193 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 TUFT1Q9NNX1 390 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 KCND2Q9NZV8 630 aa15.39■□□□□ 0.05
NEDD4L-223ENST00000588516 EIF3DO15371 548 aaKnown RBP eCLIP15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 RNF40O75150 1001 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 EYA4O95677 639 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 PLEKP08567 350 aaPredicted RBP15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 XRCC5P13010 732 aaKnown RBP15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 NR2F2P24468 414 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 SLC16A2P36021 539 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 KCNH2Q12809 1159 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 RAPGEF1Q13905 1077 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 FAM76AQ8TAV0 307 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 CRYGNQ8WXF5 182 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 EEF2KMTQ96G04 330 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 MLXIPQ9HAP2 919 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 PCDHGC5Q9Y5F6 944 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
NEDD4L-223ENST00000588516 POTEB3A0JP26 581 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 YDJCA8MPS7 323 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 TULP1O00294 542 aaPredicted RBP15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 BMP3P12645 472 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 FERP16591 822 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 PRKCIP41743 596 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 C2orf54Q08AI8 447 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 IKQ13123 557 aaPredicted RBP15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 GIT2Q14161 759 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 KLHDC7AQ5VTJ3 777 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 POTEBQ6S5H4 581 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 EPM2AIP1Q7L775 607 aaPredicted RBP15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 RASAL3Q86YV0 1011 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 SULF1Q8IWU6 871 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 MKNK1Q9BUB5 465 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 ZHX3Q9H4I2 956 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 FAM204AQ9H8W3 233 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 ARHGEF10LQ9HCE6 1279 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 NLRC4Q9NPP4 1024 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 OLFML3Q9NRN5 406 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 TMOD2Q9NZR1 351 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 HERC5Q9UII4 1024 aaKnown RBP15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 CAPN6Q9Y6Q1 641 aa15.37■□□□□ 0.05
NEDD4L-223ENST00000588516 A0A0A6YYK5 440 aaPredicted RBP15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L15C9J2P7 530 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L13C9JLJ4 530 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L11C9JVI0 530 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L18D6R9N7 530 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L22D6RA61 530 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 F5H6K3 240 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 PDE2AO00408 941 aaPredicted RBP15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 MEIS2O14770 477 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 EPHB6O15197 1021 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 NOL4O94818 638 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 NPEPPSP55786 919 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 GFPT1Q06210 699 aaPredicted RBP15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 KLRC3Q07444 240 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 RPS6KA1Q15418 735 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 PPP2R5EQ16537 467 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 ECM1Q16610 540 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 EXOC3L4Q17RC7 722 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 DOK7Q18PE1 504 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 PRR16Q569H4 304 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 MEI1Q5TIA1 1274 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 USP17L6PQ6QN14 398 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 NELFCDQ8IXH7 590 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 SMCR8Q8TEV9 937 aaPredicted RBP15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 WHAMMQ8TF30 809 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 TBC1D5Q92609 795 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 TLR10Q9BXR5 811 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 GANQ9H2C0 597 aa15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 DIS3Q9Y2L1 958 aaKnown RBP15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 POLR2AP24928 1970 aaKnown RBP15.36■□□□□ 0.05
NEDD4L-223ENST00000588516 LOXHD1Q8IVV2 1947 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 GOLGA6CA6NDK9 693 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 ZNF185O15231 689 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 RAD21O60216 631 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 MED24O75448 989 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms