RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SRGAP2BP0DMP2 458 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 STAT5BP51692 787 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 APOBRQ0VD83 1088 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 PLPP4Q5VZY2 271 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 PDE12Q6L8Q7 609 aaKnown RBP17.48■□□□□ 0.39
IFT20-216ENST00000588477 ANKRD54Q6NXT1 300 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 LLGL2Q6P1M3 1020 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 TMEM184AQ6ZMB5 413 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 PLPPR4Q7Z2D5 763 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 ERVK-5Q9HDB9 667 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 RGS18Q9NS28 235 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 KCNH7Q9NS40 1196 aa17.48■□□□□ 0.39
IFT20-216ENST00000588477 NOC2LQ9Y3T9 749 aaKnown RBP17.48■□□□□ 0.39
IFT20-216ENST00000588477 hCG_1642624A0A1W2PR95 340 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 FSCN2O14926 492 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 DDAH1O94760 285 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 KLRC1P26715 233 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 ACTR2P61160 394 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 KCNC3Q14003 757 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 SYCE2Q6PIF2 218 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 SLC24A5Q71RS6 500 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 MB21D2Q8IYB1 491 aaPredicted RBP17.47■□□□□ 0.39
IFT20-216ENST00000588477 MXRA8Q9BRK3 442 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 LZTS2Q9BRK4 669 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 SDF4Q9BRK5 362 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 CWH43Q9H720 699 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 LY9Q9HBG7 655 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 C1orf112Q9NSG2 853 aa17.47■□□□□ 0.39
IFT20-216ENST00000588477 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
IFT20-216ENST00000588477 C9IYK1 514 aa17.46■□□□□ 0.39
IFT20-216ENST00000588477 GNAQP50148 359 aa17.46■□□□□ 0.39
IFT20-216ENST00000588477 AAMPQ13685 434 aa17.46■□□□□ 0.39
IFT20-216ENST00000588477 CYP2W1Q8TAV3 490 aa17.46■□□□□ 0.39
IFT20-216ENST00000588477 TMEM40Q8WWA1 233 aa17.46■□□□□ 0.39
IFT20-216ENST00000588477 MRPS27Q92552 414 aaKnown RBP17.46■□□□□ 0.39
IFT20-216ENST00000588477 ENTPD7Q9NQZ7 604 aa17.46■□□□□ 0.39
IFT20-216ENST00000588477 TSHZ2Q9NRE2 1034 aa17.46■□□□□ 0.39
IFT20-216ENST00000588477 ST3GAL5Q9UNP4 418 aa17.46■□□□□ 0.39
IFT20-216ENST00000588477 CACNA1HO95180 2353 aa17.46■□□□□ 0.39
IFT20-216ENST00000588477 ARP10275 920 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 FGFR1P11362 822 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 RXRAP19793 462 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 ODR4Q5SWX8 454 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 NFXL1Q6ZNB6 911 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 CCDC82Q8N4S0 544 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 KREMEN2Q8NCW0 462 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 RASGRP4Q8TDF6 673 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 RUFY2Q8WXA3 655 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 TCF25Q9BQ70 676 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 PUF60Q9UHX1 559 aaKnown RBP17.45■□□□□ 0.38
IFT20-216ENST00000588477 CDH22Q9UJ99 828 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 LZTS1Q9Y250 596 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 VPS13AQ96RL7 3174 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 NFASCO94856 1347 aa17.45■□□□□ 0.38
IFT20-216ENST00000588477 SPTBN4Q9H254 2564 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 HIDE1A8MVS5 230 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 GPR182O15218 404 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 GALR2O43603 387 aaPredicted RBP17.44■□□□□ 0.38
IFT20-216ENST00000588477 ATG7O95352 703 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 GSPT1P15170 499 aaKnown RBP17.44■□□□□ 0.38
IFT20-216ENST00000588477 LAG3P18627 525 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 NUBP1P53384 320 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 PLCB3Q01970 1234 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 CASC1Q6TDU7 716 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 ASCL5Q7RTU5 278 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 KIAA0319LQ8IZA0 1049 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 PPP1R16BQ96T49 567 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 ATP6V0A4Q9HBG4 840 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 TMEM161AQ9NX61 479 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 NR2E1Q9Y466 385 aa17.44■□□□□ 0.38
IFT20-216ENST00000588477 CCDC69A6NI79 296 aa17.43■□□□□ 0.38
IFT20-216ENST00000588477 PROB1E7EW31 1015 aa17.43■□□□□ 0.38
IFT20-216ENST00000588477 HBP1O60381 514 aa17.43■□□□□ 0.38
IFT20-216ENST00000588477 HOXB8P17481 243 aaPredicted RBP17.43■□□□□ 0.38
IFT20-216ENST00000588477 PDE4AP27815 886 aa17.43■□□□□ 0.38
IFT20-216ENST00000588477 SLC26A2P50443 739 aa17.43■□□□□ 0.38
IFT20-216ENST00000588477 ITGB3BPQ13352 177 aaPredicted RBP17.43■□□□□ 0.38
IFT20-216ENST00000588477 TTC22Q5TAA0 569 aa17.43■□□□□ 0.38
IFT20-216ENST00000588477 FAM43BQ6ZT52 329 aaPredicted RBP17.43■□□□□ 0.38
IFT20-216ENST00000588477 RAB11FIP4Q86YS3 637 aa17.43■□□□□ 0.38
IFT20-216ENST00000588477 PGBD1Q96JS3 809 aa17.43■□□□□ 0.38
IFT20-216ENST00000588477 SORCS3Q9UPU3 1222 aa17.43■□□□□ 0.38
IFT20-216ENST00000588477 PTPRZ1P23471 2315 aaPredicted RBP17.42■□□□□ 0.38
IFT20-216ENST00000588477 DDX39AO00148 427 aaKnown RBP17.42■□□□□ 0.38
IFT20-216ENST00000588477 BACH1O14867 736 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 PRC1O43663 620 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 BRD1O95696 1058 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 CHMLP26374 656 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 FAM189BP81408 668 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 FOXK2Q01167 660 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 MTMR3Q13615 1198 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 KIZQ2M2Z5 673 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 KCNT2Q6UVM3 1135 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 LRRC55Q6ZSA7 311 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 TMC7Q7Z402 723 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 HEATR3Q7Z4Q2 680 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 FAM228AQ86W67 206 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 UBALD2Q8IYN6 164 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 OSMRQ99650 979 aa17.42■□□□□ 0.38
IFT20-216ENST00000588477 POMKQ9H5K3 350 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms