RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 TELO2Q9Y4R8 837 aa4.44□□□□□ -1.7
SPIRE1-212ENST00000588236 PCDHA5Q9Y5H7 936 aa4.44□□□□□ -1.7
SPIRE1-212ENST00000588236 CEP170Q5SW79 1584 aa4.44□□□□□ -1.7
SPIRE1-212ENST00000588236 ST20-MTHFSA0A0A6YYL1 179 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 SHTN1A0MZ66 631 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 ZNF839A8K0R7 811 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 RFXAPO00287 272 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 TGM5O43548 720 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 FARP2O94887 1054 aaPredicted RBP4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 SDHBP21912 280 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 FBLN1P23142 703 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 CCND1P24385 295 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 APEX1P27695 318 aaKnown RBP4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 GPR15P49685 360 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 GALK1P51570 392 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 NFATC3Q12968 1075 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 KLF1Q13351 362 aaPredicted RBP4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 MLANAQ16655 118 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 CR1LQ2VPA4 569 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 SKOR2Q2VWA4 1001 aaPredicted RBP4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 PLEKHG6Q3KR16 790 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 CATSPEREQ5SY80 951 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 KYQ8NBH2 561 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 CLRN3Q8NCR9 226 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 SIGLEC10Q96LC7 697 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 TUBGCP5Q96RT8 1024 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 SLC38A3Q99624 504 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 CNTD2Q9H8S5 307 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 MBD1Q9UIS9 605 aaPredicted RBP4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 DIP2BQ9P265 1576 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 FGD5Q6ZNL6 1462 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 WDR97A6NE52 1622 aa4.43□□□□□ -1.7
SPIRE1-212ENST00000588236 TRIM75PA6NK02 468 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 GOLGA8AA7E2F4 631 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 GOLGA8BA8MQT2 603 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 DVL2O14641 736 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 KCNK3O14649 394 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 PAX4O43316 350 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 KDM1AO60341 852 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 ALDH1L1O75891 902 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 LTFP02788 710 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 ECE1P42892 770 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 SESN2P58004 480 aaPredicted RBP4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 DLG4P78352 724 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 FOXO4P98177 505 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 PFKPQ01813 784 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 ALDH6A1Q02252 535 aaKnown RBP4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 MTMR1Q13613 665 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 SEC23AQ15436 765 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 FSCN1Q16658 493 aaKnown RBP4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 MAN2A1Q16706 1144 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 ODR4Q5SWX8 454 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 CARMIL2Q6F5E8 1435 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 KIAA1841Q6NSI8 718 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 FAM180AQ6UWF9 173 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 PRR23BQ6ZRT6 265 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 TTLL7Q6ZT98 887 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 TMEM151BQ8IW70 566 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 LINC00482Q8N8I6 264 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 DTX3Q8N9I9 347 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 MTMR8Q96EF0 704 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 CCDC136Q96JN2 1154 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 DIRC2Q96SL1 478 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 MCOLN1Q9GZU1 580 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 ZMAT4Q9H898 229 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 RXFP1Q9HBX9 757 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 BTBD7Q9P203 1132 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 ARHGAP20Q9P2F6 1191 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 MSRAQ9UJ68 235 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 IRAK3Q9Y616 596 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 NUMBLQ9Y6R0 609 aa4.42□□□□□ -1.7
SPIRE1-212ENST00000588236 PRAMEF22A3QJZ6 481 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 NFIBO00712 420 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 NRP2O60462 931 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 CUTAO60888 179 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 PRKD3O94806 890 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 MMEP08473 750 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 MED14OSP0DP75 135 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 XPAP23025 273 aaPredicted RBP4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 IGFBP6P24592 240 aaPredicted RBP4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 PTX3P26022 381 aaPredicted RBP4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 ID4P47928 161 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 NEK2P51955 445 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 SLC5A3P53794 718 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 MRPS9P82933 396 aaKnown RBP4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 ADCY2Q08462 1091 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 STILQ15468 1287 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 ZNF385BQ569K4 471 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 CCDC181Q5TID7 509 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 PRAMEF18Q5VWM3 479 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 SLFN12LQ6IEE8 588 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 RTN4RL1Q86UN2 441 aaPredicted RBP4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 CILP2Q8IUL8 1156 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 RBM12BQ8IXT5 1001 aaKnown RBP4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 STAG1Q8WVM7 1258 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 LMBR1Q8WVP7 490 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 RELTQ969Z4 430 aa4.41□□□□□ -1.7
SPIRE1-212ENST00000588236 FERMT2Q96AC1 680 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms