RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 CNGA4Q8IV77 575 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 CSGALNACT2Q8N6G5 542 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 C3orf20Q8ND61 904 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 DNAJC19Q96DA6 116 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 PANX2Q96RD6 677 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 RPAP3Q9H6T3 665 aaPredicted RBP10.57□□□□□ -0.72
LINC01539-201ENST00000587904 TUFT1Q9NNX1 390 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 BLOC1S6Q9UL45 172 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 SCAF8Q9UPN6 1271 aaKnown RBP10.57□□□□□ -0.72
LINC01539-201ENST00000587904 DNM3Q9UQ16 869 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 SSC5DA1L4H1 1573 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 PHIPQ8WWQ0 1821 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 A0A1W2PQC6 194 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 FRMD3A2A2Y4 597 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 TRIM49BA6NDI0 452 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 LGALS16A8MUM7 142 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 AHCYL1O43865 530 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 PSMD10O75832 226 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 FCER1AP12319 257 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 IDEP14735 1019 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 STAT3P40763 770 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 SPP2Q13103 211 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 HHATQ5VTY9 493 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 DYMQ7RTS9 669 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 YTHDF3Q7Z739 585 aaKnown RBP10.56□□□□□ -0.72
LINC01539-201ENST00000587904 GPBP1Q86WP2 473 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 CATSPER3Q86XQ3 398 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 MFN1Q8IWA4 741 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 MSANTD4Q8NCY6 345 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 NEK9Q8TD19 979 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 CLEC4DQ8WXI8 215 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 GJA10Q969M2 543 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 KLRG1Q96E93 195 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 AGBL1Q96MI9 1066 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 TSG101Q99816 390 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 DUSP9Q99956 384 aaKnown RBP10.56□□□□□ -0.72
LINC01539-201ENST00000587904 NAA15Q9BXJ9 866 aaKnown RBP10.56□□□□□ -0.72
LINC01539-201ENST00000587904 KLC4Q9NSK0 619 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 MRFAP1Q9Y605 127 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 MYPNQ86TC9 1320 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 LOXHD1Q8IVV2 1947 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 A6NNZ2 444 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 AKR1B15C9JRZ8 316 aaPredicted RBP10.56□□□□□ -0.72
LINC01539-201ENST00000587904 MEIS1O00470 390 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 CYP11B2P19099 503 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 PMS1P54277 932 aaKnown RBP10.56□□□□□ -0.72
LINC01539-201ENST00000587904 SLC12A3P55017 1021 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 COASYQ13057 564 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 TUBB8Q3ZCM7 444 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 FAM26FQ5R3K3 315 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 CEP85LQ5SZL2 805 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 SDCCAG8Q86SQ7 713 aaPredicted RBP10.56□□□□□ -0.72
LINC01539-201ENST00000587904 IRF2BP1Q8IU81 584 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 SYT2Q8N9I0 419 aaPredicted RBP10.56□□□□□ -0.72
LINC01539-201ENST00000587904 TC2NQ8N9U0 490 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 RIT2Q99578 217 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 ADARB2Q9NS39 739 aaKnown RBP10.56□□□□□ -0.72
LINC01539-201ENST00000587904 PANK4Q9NVE7 773 aa10.56□□□□□ -0.72
LINC01539-201ENST00000587904 POTEFA5A3E0 1075 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 GOLGA6L9A6NEM1 432 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 SMCHD1A6NHR9 2005 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 E9PMD0 336 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 TEX33O43247 280 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 GAS7O60861 476 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 SSBP05455 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
LINC01539-201ENST00000587904 FESP07332 822 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 SPATA31C1P0DKV0 1188 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 SLC8A1P32418 973 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 CCT5P48643 541 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 PCNX4Q63HM2 1172 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 ANKRD40Q6AI12 368 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 POTEGQ6S5H5 508 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 POTEEQ6S8J3 1075 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 OTOP1Q7RTM1 612 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 MYOCDQ8IZQ8 938 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 TBC1D5Q92609 795 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 IQCDQ96DY2 449 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 PLEKHG4BQ96PX9 1271 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 MXRA8Q9BRK3 442 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 FHDC1Q9C0D6 1143 aaPredicted RBP10.55□□□□□ -0.72
LINC01539-201ENST00000587904 SLC39A2Q9NP94 309 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 TAB2Q9NYJ8 693 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 PAPPA2Q9BXP8 1791 aa10.55□□□□□ -0.72
LINC01539-201ENST00000587904 VWA5AO00534 786 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 NFIBO00712 420 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 MFAP3LO75121 409 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 KIAA0754O94854 1291 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 EYA4O95677 639 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 KRT18P05783 430 aaKnown RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 ALAS1P13196 640 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 EPS15P42566 896 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 DNM2P50570 870 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 NAA25Q14CX7 972 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 XRRA1Q6P2D8 792 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 TMEM139Q8IV31 216 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 CYP2W1Q8TAV3 490 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 ZBTB10Q96DT7 871 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms