RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 MYOCDQ8IZQ8 938 aa13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 TRAPPC12Q8WVT3 735 aa13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 TNFRSF25Q93038 417 aa13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 VWCEQ96DN2 955 aa13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 AKT3Q9Y243 479 aa13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 MYH9P35579 1960 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-206ENST00000587509 GJB5O95377 273 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 CHRNA1P02708 482 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 P4HBP07237 508 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 CA3P07451 260 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 PBX2P40425 430 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 QARSP47897 775 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 RABGGTBP53611 331 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 TMEM266Q2M3C6 531 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 NCAPH2Q6IBW4 605 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 TRMT1LQ7Z2T5 733 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 NOSTRINQ8IVI9 506 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 SLC7A3Q8WY07 619 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 GUCD1Q96NT3 240 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 YME1L1Q96TA2 773 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 CDX2Q99626 313 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 RAD9AQ99638 391 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 CELF4Q9BZC1 486 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 GINS2Q9Y248 185 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 INSL6Q9Y581 213 aa13.16□□□□□ -0.3
PRKCSH-206ENST00000587509 H3BQV1 296 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 GPR182O15218 404 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 GAS2O43903 313 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 DEFB103AP81534 67 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 GUCY1B3Q02153 619 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 LPIN1Q14693 890 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 GPNMBQ14956 572 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 B3GNT9Q6UX72 402 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 OTUD6AQ7L8S5 288 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 ERMNQ8TAM6 284 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 LXNQ9BS40 222 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 RAB34Q9BZG1 259 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 YBX2Q9Y2T7 364 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 TET1Q8NFU7 2136 aa13.15□□□□□ -0.3
PRKCSH-206ENST00000587509 MICAL3Q7RTP6 2002 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 EDIL3O43854 480 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 ZNF862O60290 1169 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 RPS6KA5O75582 802 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 STAG3L1P0CL83 205 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 ATP4AP20648 1035 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 CRYBB1P53674 252 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 TMEM62Q0P6H9 643 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 EPHA7Q15375 998 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 UGCGQ16739 394 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 MTERF2Q49AM1 385 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 HAUS3Q68CZ6 603 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 EFCAB12Q6NXP0 572 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 GJA10Q969M2 543 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 SAMD11Q96NU1 681 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 NIFKQ9BYG3 293 aaKnown RBP13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 ZSWIM4Q9H7M6 989 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 RWDD3Q9Y3V2 267 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
PRKCSH-206ENST00000587509 LAMA2P24043 3122 aaKnown RBP13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 DENND3A2RUS2 1198 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 DDX11L8A8MPP1 907 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 ZBTB42B2RXF5 422 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 OR52Z1P0C646 297 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 PDCP20941 246 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 CD52P31358 61 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 MCM7P33993 719 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 RFC5P40937 340 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 CLCN3P51790 818 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 POLGP54098 1239 aaPredicted RBP13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 GRIN2CQ14957 1233 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 EARS2Q5JPH6 523 aaKnown RBP13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 TTC38Q5R3I4 469 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 C4orf19Q8IY42 314 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 KIAA0319LQ8IZA0 1049 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 MAFAQ8NHW3 353 aaPredicted RBP13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 NLRP7Q8WX94 980 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 MYLIPQ8WY64 445 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 HAS1Q92839 578 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 TTC12Q9H892 705 aaPredicted RBP13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 SUGCTQ9HAC7 445 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 C1orf112Q9NSG2 853 aa13.13□□□□□ -0.31
PRKCSH-206ENST00000587509 LAD1O00515 517 aa13.12□□□□□ -0.31
PRKCSH-206ENST00000587509 DTNBO60941 627 aa13.12□□□□□ -0.31
PRKCSH-206ENST00000587509 ATP2B1P20020 1258 aa13.12□□□□□ -0.31
PRKCSH-206ENST00000587509 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRKCSH-206ENST00000587509 YWHABP31946 246 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-206ENST00000587509 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-206ENST00000587509 KIZQ2M2Z5 673 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms