RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 GBF1Q92538 1859 aa16.66■□□□□ 0.26
ATG4D-207ENST00000587256 APBB2Q92870 758 aa16.66■□□□□ 0.26
ATG4D-207ENST00000587256 SEMA6BQ9H3T3 888 aa16.66■□□□□ 0.26
ATG4D-207ENST00000587256 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
ATG4D-207ENST00000587256 YBX2Q9Y2T7 364 aaKnown RBP16.66■□□□□ 0.26
ATG4D-207ENST00000587256 KIF28PB7ZC32 967 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 EML1O00423 815 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 AMHP03971 560 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 GJB2P29033 226 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 MCM7P33993 719 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 PSMC5P62195 406 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 LPIN1Q14693 890 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 XKR3Q5GH77 459 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 FBXO47Q5MNV8 452 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 PPP2R2DQ66LE6 453 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 TSHZ1Q6ZSZ6 1077 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 GUCD1Q96NT3 240 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 MAP7D2Q96T17 732 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 ZBED2Q9BTP6 218 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 OSBPL7Q9BZF2 842 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 ZNF576Q9H609 170 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 SLC28A3Q9HAS3 691 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 SMC3Q9UQE7 1217 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 GINS2Q9Y248 185 aa16.65■□□□□ 0.26
ATG4D-207ENST00000587256 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-207ENST00000587256 WDR81Q562E7 1941 aa16.64■□□□□ 0.26
ATG4D-207ENST00000587256 MAGEB2O15479 319 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 TLL1O43897 1013 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 DKC1O60832 514 aaKnown RBP eCLIP16.64■□□□□ 0.25
ATG4D-207ENST00000587256 MYOGP15173 224 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 CLCN3P51790 818 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 TBC1D8BQ0IIM8 1120 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 MTERF2Q49AM1 385 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 FAM117BQ6P1L5 589 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 TMCO2Q7Z6W1 182 aaPredicted RBP16.64■□□□□ 0.25
ATG4D-207ENST00000587256 MYOCDQ8IZQ8 938 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 NME8Q8N427 588 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 PPP1R16BQ96T49 567 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 LXNQ9BS40 222 aa16.64■□□□□ 0.25
ATG4D-207ENST00000587256 CELF4Q9BZC1 486 aaKnown RBP16.64■□□□□ 0.25
ATG4D-207ENST00000587256 MICAL3Q7RTP6 2002 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 TMEM150BA6NC51 233 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 DDX11L8A8MPP1 907 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 H3BQV1 296 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 CA3P07451 260 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 TMOD1P28289 359 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 TXKP42681 527 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 QARSP47897 775 aaKnown RBP16.63■□□□□ 0.25
ATG4D-207ENST00000587256 CYP4A11Q02928 519 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 SPIRE1Q08AE8 756 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 PAK2Q13177 524 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 EPHA7Q15375 998 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 TTC38Q5R3I4 469 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 MCTP1Q6DN14 999 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
ATG4D-207ENST00000587256 KIAA0319LQ8IZA0 1049 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 LRRC71Q8N4P6 559 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 TTC12Q9H892 705 aaPredicted RBP16.63■□□□□ 0.25
ATG4D-207ENST00000587256 PCDHA12Q9UN75 941 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 AKT3Q9Y243 479 aa16.63■□□□□ 0.25
ATG4D-207ENST00000587256 PTPRSQ13332 1948 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 VTNP04004 478 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 P4HBP07237 508 aaKnown RBP16.62■□□□□ 0.25
ATG4D-207ENST00000587256 CD52P31358 61 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 ORC2Q13416 577 aaPredicted RBP16.62■□□□□ 0.25
ATG4D-207ENST00000587256 PLA2G4FQ68DD2 849 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 EFCAB12Q6NXP0 572 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 USP38Q8NB14 1042 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 SCLT1Q96NL6 688 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 CDX2Q99626 313 aaPredicted RBP16.62■□□□□ 0.25
ATG4D-207ENST00000587256 SH2D3AQ9BRG2 576 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 SUGCTQ9HAC7 445 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 KDM3AQ9Y4C1 1321 aa16.62■□□□□ 0.25
ATG4D-207ENST00000587256 GJB5O95377 273 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 OR52Z1P0C646 297 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 FOSL2P15408 326 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 U2AF2P26368 475 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATG4D-207ENST00000587256 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
ATG4D-207ENST00000587256 GRIN2CQ14957 1233 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 ZNF174Q15697 407 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 KIZQ2M2Z5 673 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 MYLIPQ8WY64 445 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 MTMR9Q96QG7 549 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 OSMRQ99650 979 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 NIFKQ9BYG3 293 aaKnown RBP16.61■□□□□ 0.25
ATG4D-207ENST00000587256 TMEM60Q9H2L4 133 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 AGO3Q9H9G7 860 aaKnown RBP16.61■□□□□ 0.25
ATG4D-207ENST00000587256 RGL1Q9NZL6 768 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 STXBP5LQ9Y2K9 1186 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 SQORQ9Y6N5 450 aa16.61■□□□□ 0.25
ATG4D-207ENST00000587256 POTEMA6NI47 508 aa16.6■□□□□ 0.25
ATG4D-207ENST00000587256 STBD1O95210 358 aa16.6■□□□□ 0.25
ATG4D-207ENST00000587256 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
ATG4D-207ENST00000587256 NBR1Q14596 966 aa16.6■□□□□ 0.25
ATG4D-207ENST00000587256 TARBP2Q15633 366 aaKnown RBP16.6■□□□□ 0.25
ATG4D-207ENST00000587256 TMEM266Q2M3C6 531 aa16.6■□□□□ 0.25
ATG4D-207ENST00000587256 ANO5Q75V66 913 aa16.6■□□□□ 0.25
ATG4D-207ENST00000587256 TPH2Q8IWU9 490 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms