RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 PCDHA6Q9UN73 950 aa16.16■□□□□ 0.18
CXXC1-208ENST00000587170 PCDHB12Q9Y5F1 795 aa16.16■□□□□ 0.18
CXXC1-208ENST00000587170 PCDHA8Q9Y5H6 950 aa16.16■□□□□ 0.18
CXXC1-208ENST00000587170 CACNA1AO00555 2505 aa16.16■□□□□ 0.18
CXXC1-208ENST00000587170 C9IYK1 514 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 ST18O60284 1047 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 FGF18O76093 207 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 CALM1P0DP23 149 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 CALM2P0DP24 149 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 CALM3P0DP25 149 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 STAT5BP51692 787 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 ITGB3BPQ13352 177 aaPredicted RBP16.15■□□□□ 0.18
CXXC1-208ENST00000587170 RBM23Q86U06 439 aaKnown RBP16.15■□□□□ 0.18
CXXC1-208ENST00000587170 TMTC2Q8N394 836 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 TMEM87BQ96K49 555 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 C1orf112Q9NSG2 853 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 LRFN2Q9ULH4 789 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 LZTS1Q9Y250 596 aa16.15■□□□□ 0.18
CXXC1-208ENST00000587170 PRC1O43663 620 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 RBM10P98175 930 aaKnown RBP16.14■□□□□ 0.17
CXXC1-208ENST00000587170 COL9A3Q14050 684 aaPredicted RBP16.14■□□□□ 0.17
CXXC1-208ENST00000587170 PTPN21Q16825 1174 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 TMEM266Q2M3C6 531 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 CASC1Q6TDU7 716 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 TMTC3Q6ZXV5 915 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 SLC24A5Q71RS6 500 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 CMTR1Q8N1G2 835 aaKnown RBP16.14■□□□□ 0.17
CXXC1-208ENST00000587170 COLGALT1Q8NBJ5 622 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 CYP2W1Q8TAV3 490 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 TMEM40Q8WWA1 233 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 SDF4Q9BRK5 362 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 S1PR5Q9H228 398 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 AAASQ9NRG9 546 aa16.14■□□□□ 0.17
CXXC1-208ENST00000587170 NOC2LQ9Y3T9 749 aaKnown RBP16.14■□□□□ 0.17
CXXC1-208ENST00000587170 RBM8AQ9Y5S9 174 aaKnown RBP16.14■□□□□ 0.17
CXXC1-208ENST00000587170 PTPRZ1P23471 2315 aaPredicted RBP16.14■□□□□ 0.17
CXXC1-208ENST00000587170 ZBTB42B2RXF5 422 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 MCM5P33992 734 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 NUBP1P53384 320 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 VCPP55072 806 aaKnown RBP16.13■□□□□ 0.17
CXXC1-208ENST00000587170 ERVFC1P60507 584 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 CEP55Q53EZ4 464 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 PPP1R18Q6NYC8 613 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 KIAA0319LQ8IZA0 1049 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 NEK1Q96PY6 1258 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 CWH43Q9H720 699 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 AGO4Q9HCK5 861 aaKnown RBP16.13■□□□□ 0.17
CXXC1-208ENST00000587170 HCSTQ9UBK5 93 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 PCDHB7Q9Y5E2 793 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 CNTNAP5Q8WYK1 1306 aa16.13■□□□□ 0.17
CXXC1-208ENST00000587170 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 MEIS1O00470 390 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 PER2O15055 1255 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 RPS6KA5O75582 802 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 CCNE2O96020 404 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 ARP10275 920 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 LAG3P18627 525 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 RXRAP19793 462 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 KLRC1P26715 233 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 FAM189BP81408 668 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 PLCB3Q01970 1234 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 ODR4Q5SWX8 454 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 ABHD15Q6UXT9 468 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 NIPA1Q7RTP0 329 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 RPGRIP1Q96KN7 1286 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 ADAM2Q99965 735 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 ELAC1Q9H777 363 aaKnown RBP16.12■□□□□ 0.17
CXXC1-208ENST00000587170 RIC8AQ9NPQ8 531 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 TMEM161AQ9NX61 479 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 ST3GAL5Q9UNP4 418 aa16.12■□□□□ 0.17
CXXC1-208ENST00000587170 hCG_1642624A0A1W2PR95 340 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 DENND3A2RUS2 1198 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 TBKBP1A7MCY6 615 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 HBP1O60381 514 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 FOSP01100 380 aaPredicted RBP16.11■□□□□ 0.17
CXXC1-208ENST00000587170 SRGAP2BP0DMP2 458 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 SREBF1P36956 1147 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 NFX1Q12986 1120 aaKnown RBP16.11■□□□□ 0.17
CXXC1-208ENST00000587170 DSC3Q14574 896 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 FAM102BQ5T8I3 360 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 WWC2Q6AWC2 1192 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 TYW1BQ6NUM6 668 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 ANKRD54Q6NXT1 300 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 SYCE2Q6PIF2 218 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 HEATR3Q7Z4Q2 680 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 CCDC60Q8IWA6 550 aaPredicted RBP16.11■□□□□ 0.17
CXXC1-208ENST00000587170 IRF2BPLQ9H1B7 796 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 CDHR5Q9HBB8 845 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 TYW1Q9NV66 732 aaKnown RBP16.11■□□□□ 0.17
CXXC1-208ENST00000587170 TMEM260Q9NX78 707 aa16.11■□□□□ 0.17
CXXC1-208ENST00000587170 GPR182O15218 404 aa16.1■□□□□ 0.17
CXXC1-208ENST00000587170 C22orf31O95567 290 aa16.1■□□□□ 0.17
CXXC1-208ENST00000587170 HOXB8P17481 243 aaPredicted RBP16.1■□□□□ 0.17
CXXC1-208ENST00000587170 AVPR2P30518 371 aa16.1■□□□□ 0.17
CXXC1-208ENST00000587170 CLK2P49760 499 aaKnown RBP16.1■□□□□ 0.17
CXXC1-208ENST00000587170 CRYBB1P53674 252 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms