RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 NFASCO94856 1347 aa11.3□□□□□ -0.6
APOC1-201ENST00000586638 DNAJC25-GNG10A0A024R161 153 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 ARHGEF35A5YM69 484 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 SPATA31C2B4DYI2 1134 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 PSMA7O14818 248 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 TBCAO75347 108 aaKnown RBP11.29□□□□□ -0.6
APOC1-201ENST00000586638 SERPINC1P01008 464 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 P4HBP07237 508 aaKnown RBP11.29□□□□□ -0.6
APOC1-201ENST00000586638 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
APOC1-201ENST00000586638 MUTP22033 750 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 GIT2Q14161 759 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 LRRC41Q15345 812 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 PTPN21Q16825 1174 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 CDKAL1Q5VV42 579 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 ZNF746Q6NUN9 644 aaPredicted RBP11.29□□□□□ -0.6
APOC1-201ENST00000586638 RINT1Q6NUQ1 792 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 Q7L0L9 218 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 EEPD1Q7L9B9 569 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 TDHQ8IZJ6 230 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 TRIB2Q92519 343 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 P2RX5Q93086 422 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 UBE2OQ9C0C9 1292 aaKnown RBP11.29□□□□□ -0.6
APOC1-201ENST00000586638 MROH8Q9H579 483 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 POLD4Q9HCU8 107 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 JPH1Q9HDC5 661 aaPredicted RBP11.29□□□□□ -0.6
APOC1-201ENST00000586638 INTS13Q9NVM9 706 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 ADD3Q9UEY8 706 aaKnown RBP11.29□□□□□ -0.6
APOC1-201ENST00000586638 LAMA3Q16787 3333 aa11.29□□□□□ -0.6
APOC1-201ENST00000586638 FRMD3A2A2Y4 597 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 TMEM150BA6NC51 233 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 CBFA2T2O43439 604 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 UBA1P22314 1058 aaKnown RBP11.28□□□□□ -0.6
APOC1-201ENST00000586638 PTGS1P23219 599 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 CCNE1P24864 410 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 MAPK4P31152 587 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 SFNP31947 248 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 ICAM3P32942 547 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 CCNA1P78396 465 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 MAP3K21Q5TCX8 1036 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 PLA2G4FQ68DD2 849 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 TTI2Q6NXR4 508 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 TMC6Q7Z403 805 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
APOC1-201ENST00000586638 SOCS4Q8WXH5 440 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 NACC1Q96RE7 527 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
APOC1-201ENST00000586638 SENP7Q9BQF6 1050 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 GTPBP4Q9BZE4 634 aaKnown RBP11.28□□□□□ -0.6
APOC1-201ENST00000586638 ZSWIM4Q9H7M6 989 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
APOC1-201ENST00000586638 MTMR10Q9NXD2 777 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 SLC9A2Q9UBY0 812 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 NRBP1Q9UHY1 535 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 STXBP5LQ9Y2K9 1186 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 PCDHA2Q9Y5H9 948 aa11.28□□□□□ -0.6
APOC1-201ENST00000586638 MGAMO43451 1857 aa11.27□□□□□ -0.6
APOC1-201ENST00000586638 BICDL2A1A5D9 508 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 GOLGA6L6A8MZA4 724 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 BACH1O14867 736 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 MAFGO15525 162 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 USO1O60763 962 aaKnown RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 EIF3JO75822 258 aaKnown RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 FAM13AO94988 1023 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 ARIH2O95376 493 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 CDK11BP21127 795 aaKnown RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 PPP1R2P41236 205 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 QARSP47897 775 aaKnown RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 CASP5P51878 434 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 UBASH3AP57075 661 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 ACTR2P61160 394 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 PSMC5P62195 406 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 SP2Q02086 613 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 CACNB2Q08289 660 aaPredicted RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 PSMD2Q13200 908 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 HERC4Q5GLZ8 1057 aaPredicted RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 C1orf186Q6ZWK4 172 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 CYFIP1Q7L576 1253 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 CCDC60Q8IWA6 550 aaPredicted RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 NELFCDQ8IXH7 590 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 KCTD17Q8N5Z5 321 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 RDM1Q8NG50 284 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 DHTKD1Q96HY7 919 aaPredicted RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 CCDC43Q96MW1 224 aaKnown RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 NAP1L5Q96NT1 182 aaPredicted RBP11.27□□□□□ -0.61
APOC1-201ENST00000586638 SEMA6BQ9H3T3 888 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 TAB2Q9NYJ8 693 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 GABBR1Q9UBS5 961 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.27□□□□□ -0.614e-6■□□□□ 11
APOC1-201ENST00000586638 IGSF9BQ9UPX0 1349 aa11.27□□□□□ -0.61
APOC1-201ENST00000586638 B4DLN1 442 aa11.26□□□□□ -0.61
APOC1-201ENST00000586638 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
APOC1-201ENST00000586638 LYPLA2O95372 231 aa11.26□□□□□ -0.61
APOC1-201ENST00000586638 PSAPP07602 524 aa11.26□□□□□ -0.61
APOC1-201ENST00000586638 SUPT20HL2P0C7V6 817 aa11.26□□□□□ -0.61
APOC1-201ENST00000586638 MYBP10242 640 aa11.26□□□□□ -0.61
APOC1-201ENST00000586638 COL6A1P12109 1028 aa11.26□□□□□ -0.61
APOC1-201ENST00000586638 ADORA2AP29274 412 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms