RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 PDE4DIPQ5VU43 2346 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 GSTTP1A0A1W2PQM5 241 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 H3BRB1 525 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 SORBS3O60504 671 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 GAS7O60861 476 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 LGR5O75473 907 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 PSMD10O75832 226 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 HSP90AA1P07900 732 aaKnown RBP9.05□□□□□ -0.96
SMAD4-204ENST00000586253 ZNF286BP0CG31 522 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 SFNP31947 248 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 TCF7P36402 384 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-204ENST00000586253 SLC26A2P50443 739 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 RTP1P59025 263 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 ACTR2P61160 394 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 SKOR1P84550 965 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 BECN1Q14457 450 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 RILPL1Q5EBL4 403 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 LRCH2Q5VUJ6 765 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 MCTP1Q6DN14 999 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 BRAPQ7Z569 592 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 SLFN12Q8IYM2 578 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 RDM1Q8NG50 284 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 USB1Q9BQ65 265 aaKnown RBP9.05□□□□□ -0.96
SMAD4-204ENST00000586253 TEKT3Q9BXF9 490 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 TUT1Q9H6E5 874 aaKnown RBP9.05□□□□□ -0.96
SMAD4-204ENST00000586253 NR2E3Q9Y5X4 410 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 IGKV6D-21A0A0A0MT36 114 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 DCDC2CA8MYV0 355 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 WDR64B1ANS9 1081 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 ZBTB24O43167 697 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-204ENST00000586253 NEMFO60524 1076 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 BAG4O95429 457 aaKnown RBP9.04□□□□□ -0.96
SMAD4-204ENST00000586253 CCNE2O96020 404 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 SUPT20HL2P0C7V6 817 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 SYT1P21579 422 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 JAK3P52333 1124 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 PSMC6P62333 389 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 SP4Q02446 784 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 PPP2R5CQ13362 524 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 CALCRLQ16602 461 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 KIAA0753Q2KHM9 967 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 NBPF20Q3BBV1 942 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 TRIM60Q495X7 471 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 TTC38Q5R3I4 469 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 MIS18BP1Q6P0N0 1132 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 B3GNT9Q6UX72 402 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 ABHD15Q6UXT9 468 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 PLPPR4Q7Z2D5 763 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 FAM126BQ8IXS8 530 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 AFAP1L1Q8TED9 768 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 DPF3Q92784 378 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 HAS1Q92839 578 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 SMARCAD1Q9H4L7 1026 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 AZI2Q9H6S1 392 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 ERAP1Q9NZ08 941 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 PCDHA10Q9Y5I2 948 aa9.04□□□□□ -0.96
SMAD4-204ENST00000586253 DNAH12Q6ZR08 3092 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 TTC24A2A3L6 582 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-204ENST00000586253 VPS37CA5D8V6 355 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-204ENST00000586253 DDX39AO00148 427 aaKnown RBP9.03□□□□□ -0.96
SMAD4-204ENST00000586253 LAD1O00515 517 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 TLR3O15455 904 aaKnown RBP9.03□□□□□ -0.96
SMAD4-204ENST00000586253 STX6O43752 255 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 PQBP1O60828 265 aaKnown RBP9.03□□□□□ -0.96
SMAD4-204ENST00000586253 CD4P01730 458 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 PSAPP07602 524 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 CLTBP09497 229 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 HOXC8P31273 242 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 MCM7P33993 719 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 TOB1P50616 345 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-204ENST00000586253 TLE2Q04725 743 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 UTP14CQ5TAP6 766 aaKnown RBP9.03□□□□□ -0.96
SMAD4-204ENST00000586253 FAM160B1Q5W0V3 765 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 C7orf31Q8N865 590 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 GLG1Q92896 1179 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 TNPO1Q92973 898 aaKnown RBP9.03□□□□□ -0.96
SMAD4-204ENST00000586253 MTMR9Q96QG7 549 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 PCYT2Q99447 389 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 ATP13A2Q9NQ11 1180 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 GTF2IRD1Q9UHL9 959 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 VAV3Q9UKW4 847 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 ATP11BQ9Y2G3 1177 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 TELO2Q9Y4R8 837 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 IGSF9BQ9UPX0 1349 aa9.03□□□□□ -0.96
SMAD4-204ENST00000586253 MYH9P35579 1960 aaKnown RBP9.03□□□□□ -0.96
SMAD4-204ENST00000586253 WDR81Q562E7 1941 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 BACH1O14867 736 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 KIAA0355O15063 1070 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 HOXA2O43364 376 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 MARCH6O60337 910 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 WFS1O76024 890 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 GNAT1P11488 350 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 SNRPBP14678 240 aaKnown RBP9.02□□□□□ -0.97
SMAD4-204ENST00000586253 ATP2B1P20020 1258 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 STAT5BP51692 787 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 SPIRE1Q08AE8 756 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 FAAP100Q0VG06 881 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 FAM47CQ5HY64 1035 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 TRIM50Q86XT4 487 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 CCDC60Q8IWA6 550 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms