RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SEMA6BQ9H3T3 888 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 RMND1Q9NWS8 449 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 MTMR4Q9NYA4 1195 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SALL4Q9UJQ4 1053 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CAPN11Q9UMQ6 739 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SAMM50Q9Y512 469 aa12.69□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SSBP05455 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SHMT1P34896 483 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NONOQ15233 471 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CERKLQ49MI3 558 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 RRAGAQ7L523 313 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 FAM71BQ8TC56 605 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 DNAJC7Q99615 494 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 FGFBP2Q9BYJ0 223 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ZMYND12Q9H0C1 365 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 DHX36Q9H2U1 1008 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SEC63Q9UGP8 760 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NRXN2Q9P2S2 1712 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PCNTO95613 3336 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 MYMKA6NI61 221 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 EIF3CLB5ME19 914 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PPP1R11O60927 126 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CSPG5O95196 566 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TNNI2P48788 182 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ATP1A2P50993 1020 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TAGLNQ01995 201 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SPICE1Q8N0Z3 855 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SH2D3CQ8N5H7 860 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 EIF3CQ99613 913 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SH3GLB2Q9NR46 395 aa12.68□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ROBO3Q96MS0 1386 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PABPN1LA6NDY0 278 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 RHOBTB3O94955 611 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CCT5P48643 541 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KIF5AQ12840 1032 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GRB10Q13322 594 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SH3BP5LQ7L8J4 393 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NEK8Q86SG6 692 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CDAN1Q8IWY9 1227 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SAMD14Q8IZD0 417 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GIPC2Q8TF65 315 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PNMA5Q96PV4 448 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 IFIH1Q9BYX4 1025 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 BLOC1S4Q9NUP1 217 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TMOD2Q9NZR1 351 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 AGPSO00116 658 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 AKR1B10O60218 316 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TTLL1O95922 423 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PDHBP11177 359 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 FECHP22830 423 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SESN3P58005 492 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 IRX1P78414 480 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TRADDQ15628 312 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ZYXQ15942 572 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 MIIPQ5JXC2 388 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TRIM42Q8IWZ5 723 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 P2RX5Q93086 422 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CCSER1Q9C0I3 900 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GOLPH3Q9H4A6 298 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 DNAJC18Q9H819 358 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KMT5AQ9NQR1 393 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ARHGAP20Q9P2F6 1191 aa12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CYLC1P35663 651 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GNAQP50148 359 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 DNM2P50570 870 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GABPAQ06546 454 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SPA17Q15506 151 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 COBLL1Q53SF7 1204 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SDE2Q6IQ49 451 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 RSBN1LQ6PCB5 846 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PACS2Q86VP3 889 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 DAGLBQ8NCG7 672 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 USP33Q8TEY7 942 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 IFT81Q8WYA0 676 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TCP11L1Q9NUJ3 509 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SCN9AQ15858 1988 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 KRT83P78385 493 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CXCL9Q07325 125 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TRIM14Q14142 442 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TDRD12Q587J7 1177 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 REXO1Q8N1G1 1221 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TMEM39BQ9GZU3 492 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TAOK3Q9H2K8 898 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TBK1Q9UHD2 729 aa12.66□□□□□ -0.38
CDK5RAP3-231ENST00000584063 LRRC53A6NM62 1247 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 EEF2P13639 858 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 LIG3P49916 1009 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GUCY2FP51841 1108 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms