RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 TAF6LQ9Y6J9 622 aa8.99□□□□□ -0.97
SMCHD1-210ENST00000583800 PLXNA4Q9HCM2 1894 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 PNMA6FA0A0J9YX94 578 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 ERICH2A1L162 156 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 PRR33A8MZF0 331 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 SPATA31C2B4DYI2 1134 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 AXIN1O15169 862 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 FIBPO43427 364 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 WIPF1O43516 503 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 CSPG5O95196 566 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 GSPT1P15170 499 aaKnown RBP8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 CTNNB1P35222 781 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 SOX11P35716 441 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 ADAM17P78536 824 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 PTH1RQ03431 593 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 TROAPQ12815 778 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 TRAF1Q13077 416 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 WTAPQ15007 396 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 RUFY4Q6ZNE9 571 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 EXOC6Q8TAG9 804 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 APBB2Q92870 758 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 PABPC5Q96DU9 382 aaKnown RBP8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 USP26Q9BXU7 913 aa8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 NSUN3Q9H649 340 aaKnown RBP8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 ZNF215Q9UL58 517 aaPredicted RBP8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 MAFBQ9Y5Q3 323 aaPredicted RBP8.98□□□□□ -0.97
SMCHD1-210ENST00000583800 ZNF318Q5VUA4 2279 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 STAM2O75886 525 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 CHRNA1P02708 482 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 LINC00271P0C7V0 271 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 GHRP10912 638 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 GNAT1P11488 350 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 RPIAP49247 311 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 ANTXR2P58335 489 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 AAMPQ13685 434 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 CTC1Q2NKJ3 1217 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 PUS10Q3MIT2 529 aaKnown RBP8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 FAM26DQ5JW98 314 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 USP17L6PQ6QN14 398 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 RALYLQ86SE5 291 aaKnown RBP8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 RPAINQ86UA6 219 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 FIBCD1Q8N539 461 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 SMARCC2Q8TAQ2 1214 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 MYL10Q9BUA6 226 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 CLDND1Q9NY35 253 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 ADGRA3Q8IWK6 1321 aa8.97□□□□□ -0.97
SMCHD1-210ENST00000583800 C5orf42Q9H799 3197 aa8.96□□□□□ -0.97
SMCHD1-210ENST00000583800 E7EWF7 191 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 MEIS2O14770 477 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 GRM6O15303 877 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 ATP9AO75110 1047 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 ALADP13716 330 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 MARK3P27448 753 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 TCF7P36402 384 aaPredicted RBP8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 ZP2Q05996 745 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 MGAT3Q09327 533 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 COL19A1Q14993 1142 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 SART3Q15020 963 aaKnown RBP8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 CLUL1Q15846 466 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 TTC22Q5TAA0 569 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 PCNX4Q63HM2 1172 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 CATIPQ7Z7H3 387 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 NCOA7Q8NI08 942 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 IL17RAQ96F46 866 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 UIMC1Q96RL1 719 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 SPSB2Q99619 263 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 RC3H2Q9HBD1 1191 aaKnown RBP8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 KIAA1522Q9P206 1035 aaPredicted RBP8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 EVPLQ92817 2033 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 NRCAMQ92823 1304 aa8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 FNDC1Q4ZHG4 1894 aaPredicted RBP8.96□□□□□ -0.98
SMCHD1-210ENST00000583800 TECTAO75443 2155 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 C5orf67F2Z3F1 127 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 DCXO43602 365 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 PLEKHA8P1O95397 391 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 KCNA2P16389 499 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 GTF2F1P35269 517 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 LTBRP36941 435 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 INSM1Q01101 510 aaPredicted RBP8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 DLX2Q07687 328 aaPredicted RBP8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 HYAL1Q12794 435 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 PPFIA1Q13136 1202 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 LPIN1Q14693 890 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 GRIK4Q16099 956 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 TAF2Q6P1X5 1199 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 NLRX1Q86UT6 975 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 ALYREFQ86V81 257 aaKnown RBP8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 MB21D2Q8IYB1 491 aaPredicted RBP8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 ZNF654Q8IZM8 581 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 CTCFLQ8NI51 663 aaPredicted RBP8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 IGDCC4Q8TDY8 1250 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 DNAJB3Q8WWF6 145 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 LINC01599Q8WXQ3 324 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 CUL5Q93034 780 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 ZBTB10Q96DT7 871 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 RRP36Q96EU6 259 aaKnown RBP8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 SENP7Q9BQF6 1050 aa8.95□□□□□ -0.98
SMCHD1-210ENST00000583800 SPZ1Q9BXG8 430 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms