RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 XKR3Q5GH77 459 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 FAM26DQ5JW98 314 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 LARP1BQ659C4 914 aaKnown RBP9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 MTHFD1LQ6UB35 978 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 C16orf59Q7L2K0 433 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 POTEDQ86YR6 584 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 DEFB123Q8N688 67 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 TMEM87AQ8NBN3 555 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 ERMNQ8TAM6 284 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 CCDC43Q96MW1 224 aaKnown RBP9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 UIMC1Q96RL1 719 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 RAB34Q9BZG1 259 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 FAM49AQ9H0Q0 323 aaPredicted RBP9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 PCDHA12Q9UN75 941 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 TELO2Q9Y4R8 837 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 TRPV2Q9Y5S1 764 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 STK24Q9Y6E0 443 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 SQORQ9Y6N5 450 aa9.6□□□□□ -0.87
SUPT6H-208ENST00000583340 GOLGA6L3A6NEY3 463 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 SOX1O00570 391 aaPredicted RBP9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 NBNO60934 754 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 P4HBP07237 508 aaKnown RBP9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 ATP2B1P20020 1258 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 DNAJB2P25686 324 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 KLRC1P26715 233 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 QARSP47897 775 aaKnown RBP9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 EPHA7Q15375 998 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 NCAPH2Q6IBW4 605 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 RUFY4Q6ZNE9 571 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 TSHZ1Q6ZSZ6 1077 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 OTUD6AQ7L8S5 288 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 METTL13Q8N6R0 699 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 DNAJB3Q8WWF6 145 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 TIFAQ96CG3 184 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 FTHL17Q9BXU8 183 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 IFIH1Q9BYX4 1025 aaKnown RBP9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 LMBRD1Q9NUN5 540 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 PCDH10Q9P2E7 1040 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 SEPT9Q9UHD8 586 aaPredicted RBP9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 MTMR6Q9Y217 621 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 PCDHA11Q9Y5I1 949 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 CDY2AQ9Y6F7 541 aa9.59□□□□□ -0.87
SUPT6H-208ENST00000583340 MYH15Q9Y2K3 1946 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 LAD1O00515 517 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 EDIL3O43854 480 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 GAS2O43903 313 aaKnown RBP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 SLC34A2O95436 690 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 OR52Z1P0C646 297 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 U2AF2P26368 475 aaKnown RBP eCLIP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 MCM7P33993 719 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 WDR5P61964 334 aaKnown RBP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 KRT85P78386 507 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 HIC1Q14526 733 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 PLEKHG4Q58EX7 1191 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 RILPL1Q5EBL4 403 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 TTC38Q5R3I4 469 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 MARCH8Q5T0T0 291 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 FOXD4L5Q5VV16 416 aaPredicted RBP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 HAUS3Q68CZ6 603 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 B3GNT9Q6UX72 402 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 TRMT1LQ7Z2T5 733 aaKnown RBP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 FOXD4L4Q8WXT5 416 aaPredicted RBP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 SLC7A3Q8WY07 619 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 HAS1Q92839 578 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 WNT8BQ93098 351 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 SCLT1Q96NL6 688 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 CELF4Q9BZC1 486 aaKnown RBP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 ZSCAN16Q9H4T2 348 aaPredicted RBP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 ZSWIM4Q9H7M6 989 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 TTC12Q9H892 705 aaPredicted RBP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 SLC28A3Q9HAS3 691 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 CXXC1Q9P0U4 656 aaPredicted RBP9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 VAV3Q9UKW4 847 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 AKT3Q9Y243 479 aa9.58□□□□□ -0.88
SUPT6H-208ENST00000583340 KDM3AQ9Y4C1 1321 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 LAMA3Q16787 3333 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 SCN5AQ14524 2016 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 FAM205CA6NFA0 338 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 TLL1O43897 1013 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 DTNBO60941 627 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 C22orf31O95567 290 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 BMP15O95972 392 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 GHRP10912 638 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 TXKP42681 527 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 PAK2Q13177 524 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 MTERF2Q49AM1 385 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 EARS2Q5JPH6 523 aaKnown RBP9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 EFCAB12Q6NXP0 572 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 TRAF7Q6Q0C0 670 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 HERC6Q8IVU3 1022 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 C4orf19Q8IY42 314 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 BANK1Q8NDB2 785 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 DBF4BQ8NFT6 615 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 TRAPPC12Q8WVT3 735 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 GJA10Q969M2 543 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 LXNQ9BS40 222 aa9.57□□□□□ -0.88
SUPT6H-208ENST00000583340 NIFKQ9BYG3 293 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms